Top 30 most abundant species identified from the <i>de novo</i> predicted genes.

<p>Top 30 most abundant species identified from the <i>de novo</i> predicted genes.</p

Phylum taxonomic level heat map derived from mapping against the RefSeq database.

<p>(A) Bacteria phylum. (B) Eukaryota phylum. The most abundant bacterial phyla are <i>Proteobacteria</i>, <i>Actinobacteria</i>, and <i>Bacteroidetes</i>. <i>Cyanobacteria</i> are also present at high abundance. Different phyla of fungi are also present at high abundance, however we also identify higher-level eukaryotes like insects, worms, and marine species, at both large and low abundances.</p

Tjuv-Ante’s cave sampled speleothem type.

<p>Sample 1 was taken from the basal part of the speleothem, from a relatively old formation. Sample 2 was taken from a higher up location in the speleothem and comes from a relatively recent formation.</p

Comparison of the top 50 most abundant functions.

<p>Heat map of the top 50 most abundant L3 functions identified with KEGG.</p

Damage pattern.

<p>Damage pattern on the reads from sample 1 uniquely mapping to the bacteria database in MGmapper from (A) all the mapping reads, (B) the subset of long reads, (C) the subset of short reads. C to T damage is depicted in red color, and G to A is depicted in blue color. Grey lines represent other nucleotides derived from other types of DNA damage. The orange line represents soft-clipped bases, those that are not aligned to the reference.</p

Aligned eastern gorilla mitogenomes in fasta format

Eastern gorilla mitogenomes obtained from fecal and historical museum specimens. <div><br></div><div>Used in the study van der Valk et. al. 2018, Significant loss of mitochondrial diversity within the last century due to extinction of peripheral populations in eastern gorillas, Scientific reports<br></div