Structural Effects of Small Molecules on Phospholipid Bilayers Investigated by Molecular Simulations

We summarize and compare recent Molecular Dynamics simulations on the interactions of dipalmitoylphosphatidylcholine (DPPC) bilayers in the liquid crystalline phase with a number of small molecules including trehalose, a disaccharide of glucose, alcohols, and dimethylsulfoxide (DMSO). The sugar molecules tend to stabilize the structure of the bilayer as they bridge adjacent lipid headgroups. They do not strongly change the structure of the bilayer. Alcohols and DMSO destabilize the bilayer as they increase its area per molecule in the bilayer plane and decrease the order parameter. Alcohols have a stronger detrimental effect than DMSO. The observables which we compare are the area per molecule in the plane of the bilayer, the membrane thickness, and the NMR order parameter of DPPC hydrocarbon tails. The area per molecule and the order parameter are very well correlated whereas the bilayer thickness is not necessarily correlated with them.Comment: 8 pages, 3 figures, accepted to Fluid Phase Equilibri

Instabilities and resistance fluctuations in thin accelerated superconducting rings

The non-equilibrium properties of a driven quasi-one dimensional superconducting ring subjected to a constant electromotive force ({\it emf}) is studied. The {\it emf} accelerates the superconducting electrons until the critical current is reached and a dissipative phase slip occurs that lowers the current. The phase slip phenomena is examined as a function of the strength of the {\it emf}, thermal noise, and normal state resistivity. Numerical and analytic methods are used to make detailed predictions for the magnitude of phase slips and subsequent dissipation.Comment: Some movies are available here at http://www.lce.hut.fi/~karttune/S

Spectral representation of the effective dielectric constant of graded composites

We generalize the Bergman-Milton spectral representation, originally derived for a two-component composite, to extract the spectral density function for the effective dielectric constant of a graded composite. This work has been motivated by a recent study of the optical absorption spectrum of a graded metallic film [Applied Physics Letters, 85, 94 (2004)] in which a broad surface-plasmon absorption band has been shown to be responsible for enhanced nonlinear optical response as well as an attractive figure of merit. It turns out that, unlike in the case of homogeneous constituent components, the characteristic function of a graded composite is a continuous function because of the continuous variation of the dielectric function within the constituent components. Analytic generalization to three dimensional graded composites is discussed, and numerical calculations of multilayered composites are given as a simple application.Comment: Physical Review E, submitted for publication

Phase Diagram and Commensurate-Incommensurate Transitions in the Phase Field Crystal Model with an External Pinning Potential

We study the phase diagram and the commensurate-incommensurate transitions in a phase field model of a two-dimensional crystal lattice in the presence of an external pinning potential. The model allows for both elastic and plastic deformations and provides a continuum description of lattice systems, such as for adsorbed atomic layers or two-dimensional vortex lattices. Analytically, a mode expansion analysis is used to determine the ground states and the commensurate-incommensurate transitions in the model as a function of the strength of the pinning potential and the lattice mismatch parameter. Numerical minimization of the corresponding free energy shows good agreement with the analytical predictions and provides details on the topological defects in the transition region. We find that for small mismatch the transition is of first-order, and it remains so for the largest values of mismatch studied here. Our results are consistent with results of simulations for atomistic models of adsorbed overlayers

Main innovation types of forest biomass supply chains

201

Phase diagram of pinned lattices in the phase field crystal model

We study the phase diagram and the commensurate-incommensurate phase transitions of a two-dimensional phase field crystal model for adsorbed layers. The model allows for both elastic and plastic deformations on atomic and diffusive time-scales, and provides a continuum description of lattice systems, such as adsorbed atomic layers or two-dimensional vortex lattices. Analytically, mode expansion analysis and numerical minimization of the free energy are used to determine the ground states as a function of the pinning potential and lattice mismatch parameter. The results show a rich phase diagram with several different types of commensurate and incommensurate phases.Peer reviewe

Electrokinetic behavior of two touching inhomogeneous biological cells and colloidal particles: Effects of multipolar interactions

We present a theory to investigate electro-kinetic behavior, namely, electrorotation and dielectrophoresis under alternating current (AC) applied fields for a pair of touching inhomogeneous colloidal particles and biological cells. These inhomogeneous particles are treated as graded ones with physically motivated model dielectric and conductivity profiles. The mutual polarization interaction between the particles yields a change in their respective dipole moments, and hence in the AC electrokinetic spectra. The multipolar interactions between polarized particles are accurately captured by the multiple images method. In the point-dipole limit, our theory reproduces the known results. We find that the multipolar interactions as well as the spatial fluctuations inside the particles can affect the AC electrokinetic spectra significantly.Comment: Revised version with minor changes: References added and discussion extende

Dielectrophoresis of charged colloidal suspensions

We present a theoretical study of dielectrophoretic (DEP) crossover spectrum of two polarizable particles under the action of a nonuniform AC electric field. For two approaching particles, the mutual polarization interaction yields a change in their respective dipole moments, and hence, in the DEP crossover spectrum. The induced polarization effects are captured by the multiple image method. Using spectral representation theory, an analytic expression for the DEP force is derived. We find that the mutual polarization effects can change the crossover frequency at which the DEP force changes sign. The results are found to be in agreement with recent experimental observation and as they go beyond the standard theory, they help to clarify the important question of the underlying polarization mechanisms