El Progreso : semanario independiente: Ano IX Número 1585 - 1915 marzo 30

Title of data: Functionally relevant variants found in the genes in “NOD-like receptor signaling pathway”, “Protein processing in endoplasmic reticulum”, “RNA tansport” and “Fatty acid elongation in mitochondria” KEGG pathways. Description of data: Worksheet providing the description and phenotypes of the functionally relevant variants found in the genes in “NOD-like receptor signaling pathway”, “Protein processing in endoplasmic reticulum”, “RNA tansport“and “Fatty acid elongation in mitochondria” KEGG pathways. (XLSX 15 kb

MOESM5 of Exploring the mechanisms of resistance to Teladorsagia circumcincta infection in sheep through transcriptome analysis of abomasal mucosa and abomasal lymph nodes

Additional file 5. Gene-set enrichment analysis (GO) for the highly expressed genes in lymph node tissue. Significant terms from the Gene Ontology (GO) enrichment analysis performed with WebGestalt for the genes identified as highly expressed (≥ 500 FPKM) specifically in lymph node

MOESM8 of Exploring the mechanisms of resistance to Teladorsagia circumcincta infection in sheep through transcriptome analysis of abomasal mucosa and abomasal lymph nodes

Additional file 8. List of DEGs identified as GIN-activated genes for the abomasal lymph node samples (Resistant and Susceptible ewes to T. circumcincta infection). The log2FoldChange value obtained from the EdgeR and DESeq analyses are given for the genes identified as GIN-activated in the resistant group and for the genes identified as GIN-activated in the susceptible group

MOESM9 of Exploring the mechanisms of resistance to Teladorsagia circumcincta infection in sheep through transcriptome analysis of abomasal mucosa and abomasal lymph nodes

Additional file 9. Significant terms from the Gene Ontology (GO) enrichment analysis performed with WebGestalt for the genes identified as GIN-activated in abomasal lymph node tissue. The results of the GO enrichment analysis are provided separately for the genes identified as up-regulated in the resistant and susceptible groups

MOESM7 of Exploring the mechanisms of resistance to Teladorsagia circumcincta infection in sheep through transcriptome analysis of abomasal mucosa and abomasal lymph nodes

Additional file 7. List of genes identified as significantly differentially expressed genes (DEGs) by the DESeq analysis for the abomasal mucosa samples. The log2FoldChange value obtained from the DESeq analysis is given for the genes identified as up-regulated in the resistant group and for the genes identified as up-regulated in the susceptible group

MOESM1 of Exploring the mechanisms of resistance to Teladorsagia circumcincta infection in sheep through transcriptome analysis of abomasal mucosa and abomasal lymph nodes

Additional file 1. Gene expression levels in the two tissues and conditions studied. Distribution of gene expression levels for the genes expressed in the transcriptome of abomasal mucosa and abomasal lymph node samples for the two groups of animals compared in the present study

Additional file 2: of Variant discovery in the sheep milk transcriptome using RNA sequencing

Title of data: Genes in QTL regions containing relevant functional variants. Description of data: Worksheet providing the list of genes within QTL regions, which contain variants with functional interest. (XLSX 15 kb