2 research outputs found
Mg<sup>2+</sup> Shifts Ligand-Mediated Folding of a Riboswitch from Induced-Fit to Conformational Selection
Bacterial
riboswitches couple small-molecule ligand binding to
RNA conformational changes that widely regulate gene expression, rendering
them potential targets for antibiotic intervention. Despite structural
insights, the ligand-mediated folding mechanisms of riboswitches are
still poorly understood. Using single-molecule fluorescence resonance
energy transfer (smFRET), we have investigated the folding mechanism
of an H-type pseudoknotted preQ<sub>1</sub> riboswitch in dependence
of Mg<sup>2+</sup> and three ligands of distinct affinities. We show
that, in the absence of Mg<sup>2+</sup>, both weakly and strongly
bound ligands promote pseudoknot docking through an induced-fit mechanism.
By contrast, addition of as low as 10 μM Mg<sup>2+</sup> generally
shifts docking toward conformational selection by stabilizing a folded-like
conformation prior to ligand binding. Supporting evidence from transition-state
analysis further highlights the particular importance of stacking
interactions during induced-fit and of specific hydrogen bonds during
conformational selection. Our mechanistic dissection provides unprecedented
insights into the intricate synergy between ligand- and Mg<sup>2+</sup>-mediated RNA folding
Photochemical Charge Separation at Particle Interfaces: The n‑BiVO<sub>4</sub>–p-Silicon System
The charge transfer properties of
interfaces are central to the function of photovoltaic and photoelectrochemical
cells and photocatalysts. Here we employ surface photovoltage spectroscopy
(SPS) to study photochemical charge transfer at a p-silicon/n-BiVO<sub>4</sub> particle interface. Particle films of BiVO<sub>4</sub> on
an aluminum-doped p-silicon wafer were obtained by drop-coating particle
suspensions followed by thermal annealing at 353 K. Photochemical
charge separation of the films was probed as a function of layer thickness
and illumination intensity, and in the presence of methanol as a sacrificial
electron donor. Electron injection from the BiVO<sub>4</sub> into
the p-silicon is clearly observed to occur and to result in a maximum
photovoltage of 150 mV for a 1650 nm thick film under 0.3 mW cm<sup>–2</sup> illumination at 3.5 eV. This establishes the BiVO<sub>4</sub>–p-Si interface as a tandem-like junction. Charge separation
in the BiVO<sub>4</sub> film is limited by light absorption and by
slow electron transport to the Si interface, based on time-dependent
SPS measurements. These problems need to be overcome in functional
tandem devices for photoelectrochemical water oxidation