38 research outputs found

    Appendix A. A list of the studies included in the analysis.

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    A list of the studies included in the analysis

    Appendix B. The analyses conducted with pure environmental fraction (E/S).

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    The analyses conducted with pure environmental fraction (E/S)

    Appendix C. Details of the diatom case study.

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    Details of the diatom case study

    Appendix C. Results of variation partitioning for the taxa richness of phytoplankton and zooplankton in terms of fractions of variation explained.

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    Results of variation partitioning for the taxa richness of phytoplankton and zooplankton in terms of fractions of variation explained

    Appendix A. Means and ranges for the environmental variables of lakes.

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    Means and ranges for the environmental variables of lakes

    Appendix B. Bayesian estimation schemes.

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    Bayesian estimation schemes

    Appendix B. Spatial correlogram of the phytoplankton and the zooplankton taxa richness.

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    Spatial correlogram of the phytoplankton and the zooplankton taxa richness

    Appendix A. Generation of simulated communities.

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    Generation of simulated communities

    Supplement 1. Source code for parameter estimation.

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    <h2>File List</h2><blockquote> <a href="data_abundance.csv">data_abundance.csv</a><br> <br> <a href="environment.csv">environment.csv</a><br> <br> <a href="Diatom_data_MCMC.nb">Diatom_data_MCMC.nb</a><br> <br> <a href="Simulated_data_MCMC.nb">Simulated_data_MCMC.nb</a><br> <br> <a href="Diatom_data_MCMC.txt">Diatom_data_MCMC.txt</a><br> <br> <a href="Simulated_data_MCMC.txt">Simulated_data_MCMC.txt</a><br> </blockquote><h2>Description</h2><blockquote> The MCMC sampling was implemented with Mathematica 7.0.1. The code Diatom_data_MCMC.nb can be used to apply the estimation scheme to the real diatom data, given in files data_abundance.csv and environment.csv. The code Simulated_data_MCMC.nb can be used to generate simulated data and to fit the model to the simulated data. The files Diatom_data_MCMC.txt and Simulated_data_MCMC.txt include the two Mathematica notebooks in text format. </blockquote
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