219 research outputs found
Distributed-memory large deformation diffeomorphic 3D image registration
We present a parallel distributed-memory algorithm for large deformation
diffeomorphic registration of volumetric images that produces large isochoric
deformations (locally volume preserving). Image registration is a key
technology in medical image analysis. Our algorithm uses a partial differential
equation constrained optimal control formulation. Finding the optimal
deformation map requires the solution of a highly nonlinear problem that
involves pseudo-differential operators, biharmonic operators, and pure
advection operators both forward and back- ward in time. A key issue is the
time to solution, which poses the demand for efficient optimization methods as
well as an effective utilization of high performance computing resources. To
address this problem we use a preconditioned, inexact, Gauss-Newton- Krylov
solver. Our algorithm integrates several components: a spectral discretization
in space, a semi-Lagrangian formulation in time, analytic adjoints, different
regularization functionals (including volume-preserving ones), a spectral
preconditioner, a highly optimized distributed Fast Fourier Transform, and a
cubic interpolation scheme for the semi-Lagrangian time-stepping. We
demonstrate the scalability of our algorithm on images with resolution of up to
on the "Maverick" and "Stampede" systems at the Texas Advanced
Computing Center (TACC). The critical problem in the medical imaging
application domain is strong scaling, that is, solving registration problems of
a moderate size of ---a typical resolution for medical images. We are
able to solve the registration problem for images of this size in less than
five seconds on 64 x86 nodes of TACC's "Maverick" system.Comment: accepted for publication at SC16 in Salt Lake City, Utah, USA;
November 201
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Distribution System Disturbance Analysis and Outage Management Using Hybrid Data-Driven and Physics-Based Approaches
Securing cyber-power distribution systems (DS) against malicious events is critical with the integration of distributed energy resources (DERs), supporting automation and increasing vulnerabilities. Situational awareness utilizing power data (e.g., data from distribution phasor measurement units (D-PMUs)) and cyber data (e.g., network packets data) is the main focus of this dissertation by means of which, an opportunity for real-time monitoring and decision-making is provided. To further improve the DS’s reliable and resilient operation, in this Ph.D. work, the aim has been put towards the development of an automated tool consisting of multiple modules to precisely investigate any type of data anomalies, followed by root cause finding. For this purpose, a data aggregation scheme is developed to synchronize the resolution and time stamp of multiple metering sources throughout the DS, using an enhancement of the conventional Kalman Filter, named Ensemble Extended Kalman Filter (EEKF). EEKF is implemented as an automated module by exploiting the real-time measurements as well as deriving the system physics. Furthermore, this dissertation develops online cyber-physical event detection and classification as well as proposal of the novel Outage Root Cause Analysis (ORCA) system. Different sections of the work have been tested on IEEE and OPAL-RT test systems as well as real-filed measurements from installed actual hardwares
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