Additional file 2: of Long non-coding RNAs of switchgrass (Panicum virgatum L.) in multiple dehydration stresses

Table S1. List of memory lncRNAs. Table S2. Primers used in qRT-PCR. Table S3. Expression summary of different samples and treatments. Table S4. List of differentially expressed lncRNAs. Table S5. LncRNAs annotated by antisense and upstream or downstream. Table S6. Differentially expressed lncRNAs and the annotated genes. Table S7. Differentially expressed lncRNAs annotated with differentially expressed genes. Table S8. GO term _ response to stress. Table S9. Top 20 pathway enriched in annotation genes. Table S10. LncRNAs and genes involved in ABA biosynthesis and signal transduction. Table S11. LncRNAs and genes involved in ETH biosynthesis and signal transduction. Table S12. LncRNAs and genes involved in starch and sucrose metabolism. Table S13. Dehydration response and transcriptional memory genes or lncRNAs in switchgrass, maize and Arabidopsis. (ZIP 3778 kb

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Additional file 3: Table: S2. Primers used in qRT-PCR

MOESM1 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

Additional file 1: Figure S1. Overview of the RNA-Seq results and repeatability of different biological replicates. The first eight figures show the proportion of clean reads in the sequenced samples; the next three figures show the repeated expression of genes in two biological replicates; the last four figures showed the correlations between differentially expressed genes in two biological replicates. C, control; D1-2, the first and second dehydration stresses; R1, the first recovery period

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Additional file 8: Table S7. Differentially expressed genes involved in the biosynthesis of L-proline, stachyose and trehalose

MOESM10 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

Additional file 10: Table S9. Differentially expressed genes involved in glycolysis and TCA cycle

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Additional file 12: Table S11. Common DMGs in switchgrass and maize

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Additional file 6: Table S5. Differentially expressed genes involved in JA biosynthesis and signal transduction

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Additional file 9: Table S8. Differentially expressed genes involved in photosynthesis

MOESM11 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

Additional file 11: Table S10. Differentially expressed genes involved in lignin biosynthesis

MOESM5 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

Additional file 5: Table S4. Differentially expressed genes involved in ABA biosynthesis, degradation and signal transduction