Supervised clustering of SAM selected genes belonging to cluster II and involved in translation

<p><b>Copyright information:</b></p><p>Taken from "Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule"</p><p>http://www.biomedcentral.com/1471-2164/8/438</p><p>BMC Genomics 2007;8():438-438.</p><p>Published online 28 Nov 2007</p><p>PMCID:PMC2238769.</p><p></p> Columns as in figure 2

Supervised clustering of SAM selected genes belonging to cluster I and involved in protein degradation

<p><b>Copyright information:</b></p><p>Taken from "Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule"</p><p>http://www.biomedcentral.com/1471-2164/8/438</p><p>BMC Genomics 2007;8():438-438.</p><p>Published online 28 Nov 2007</p><p>PMCID:PMC2238769.</p><p></p> Columns as in figure 2

Relative mRNA expression levels of selected genes in muscle from fasted (F), 4 (4), 7 (7), 11 (11) and 36 (36) day-refed trout as obtained by microarray hybridisation (left) and Q-PCR (right)

<p><b>Copyright information:</b></p><p>Taken from "Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule"</p><p>http://www.biomedcentral.com/1471-2164/8/438</p><p>BMC Genomics 2007;8():438-438.</p><p>Published online 28 Nov 2007</p><p>PMCID:PMC2238769.</p><p></p> The mRNA levels measured by Q-PCR were normalized to levels of 18S rRNA. Bars sharing the same letter(s) are not significantly different (p < 0.05)

Supervised clustering of SAM selected genes belonging to cluster II and involved in chaperon activity

<p><b>Copyright information:</b></p><p>Taken from "Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule"</p><p>http://www.biomedcentral.com/1471-2164/8/438</p><p>BMC Genomics 2007;8():438-438.</p><p>Published online 28 Nov 2007</p><p>PMCID:PMC2238769.</p><p></p> Columns as in figure 2

Supervised clustering of SAM selected genes belonging to cluster II and involved in RNA synthesis and processing

<p><b>Copyright information:</b></p><p>Taken from "Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule"</p><p>http://www.biomedcentral.com/1471-2164/8/438</p><p>BMC Genomics 2007;8():438-438.</p><p>Published online 28 Nov 2007</p><p>PMCID:PMC2238769.</p><p></p> Columns as in figure 2

Supervised clustering of SAM selected genes belonging to cluster III and IV and involved in reticulum and Golgi dynamics

<p><b>Copyright information:</b></p><p>Taken from "Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule"</p><p>http://www.biomedcentral.com/1471-2164/8/438</p><p>BMC Genomics 2007;8():438-438.</p><p>Published online 28 Nov 2007</p><p>PMCID:PMC2238769.</p><p></p> Columns as in figure 2

Supervised clustering analysis of the differentially expressed genes selected by SAM

<p><b>Copyright information:</b></p><p>Taken from "Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule"</p><p>http://www.biomedcentral.com/1471-2164/8/438</p><p>BMC Genomics 2007;8():438-438.</p><p>Published online 28 Nov 2007</p><p>PMCID:PMC2238769.</p><p></p> Cluster I comprises genes up-regulated in muscle from fasted animals, cluster II includes genes with transient induction 4 to 11 days post-refeeding, cluster III contains genes whose expression began at 7 days post refeeding and was maintained up to 36 days post-refeeding and cluster IV contains genes up-regulated 36 days post-refeeding. Each row represents the temporal expression pattern of a single gene and each column corresponds to a single sample: columns 1 to 8: muscle from distinct fasted trout ; columns 9 to 17, 18 to 26, 27 to 34 and 35 to 43 : muscle from 4, 7, 11 and 36 day distinct refed trout, respectively. Expression levels are represented by a color tag, with red representing the highest levels and green the lowest levels of expression

Ontology-matrix showing functional grouping of genes belonging to clusters I–IV

<p><b>Copyright information:</b></p><p>Taken from "Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule"</p><p>http://www.biomedcentral.com/1471-2164/8/438</p><p>BMC Genomics 2007;8():438-438.</p><p>Published online 28 Nov 2007</p><p>PMCID:PMC2238769.</p><p></p> The enrichment of genes of a given functional class is indicated for each cluster. Also are represented the p-values. Dark and light colors represent P-values of < 0.005 and < 0.05 respectivel

Supervised clustering of SAM selected genes belonging to cluster II and involved in ribosome formation

<p><b>Copyright information:</b></p><p>Taken from "Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule"</p><p>http://www.biomedcentral.com/1471-2164/8/438</p><p>BMC Genomics 2007;8():438-438.</p><p>Published online 28 Nov 2007</p><p>PMCID:PMC2238769.</p><p></p> Genes regulating ribosome biogenesis segregate from genes encoding ribosomal proteins forming a subcluster peaking at 4 days post-refeeding. Columns as in figure 2

Supervised clustering of SAM selected genes induced during muscle recovery growth and involved in transcriptional regulation

<p><b>Copyright information:</b></p><p>Taken from "Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule"</p><p>http://www.biomedcentral.com/1471-2164/8/438</p><p>BMC Genomics 2007;8():438-438.</p><p>Published online 28 Nov 2007</p><p>PMCID:PMC2238769.</p><p></p> Columns as in figure 2