Comparative Analysis of PvPAP Gene Family and Their Functions in Response to Phosphorus Deficiency in Common Bean

BACKGROUND: Purple acid phosphatases (PAPs) play a vital role in adaptive strategies of plants to phosphorus (P) deficiency. However, their functions in relation to P efficiency are fragmentary in common bean. PRINCIPAL FINDINGS: Five PvPAPs were isolated and sequenced in common bean. Phylogenetic analysis showed that PvPAPs could be classified into two groups, including a small group with low molecular mass, and a large group with high molecular mass. Among them, PvPAP3, PvPAP4 and PvPAP5 belong to the small group, while the other two belong to the large group. Transient expression of 35S:PvPAPs-GFP on onion epidermal cells verified the variations of subcellular localization among PvPAPs, suggesting functional diversities of PvPAPs in common bean. Quantitative PCR results showed that most PvPAPs were up-regulated by phosphate (Pi) starvation. Among them, the expression of the small group PvPAPs responded more to Pi starvation, especially in the roots of G19833, the P-efficient genotype. However, only overexpressing PvPAP1 and PvPAP3 could result in significantly increased utilization of extracellular dNTPs in the transgenic bean hairy roots. Furthermore, overexpressing PvPAP3 in Arabidopsis enhanced both plant growth and total P content when dNTPs were supplied as the sole external P source. CONCLUSIONS: The results suggest that PvPAPs in bean varied in protein structure, response to P deficiency and subcellular localization. Among them, both PvPAP1 and PvPAP3 might function as utilization of extracellular dNTPs

Four decades of post-agricultural forest development have caused major redistributions of soil phosphorus fractions

Fertilisation of agricultural land causes an accumulation of nutrients in the top soil layer, among which phosphorus (P) is particularly persistent. Changing land use from farmland to forest affects soil properties, but changes in P pools have rarely been studied despite their importance to forest ecosystem development. Here, we describe the redistributions of the P pools in a four-decadal chronosequence of post-agricultural common oak (Quercus robur L.) forests in Belgium and Denmark. The aim was to assess whether forest age causes a repartitioning of P throughout the various soil P pools (labile P, slowly cycling P and occluded P); in particular, we addressed the time-related alterations in the inorganic versus organic P fractions. In less than 40 years of oak forest development, significant redistributions have occurred between different P fractions. While both the labile and the slowly cycling inorganic P fractions significantly decreased with forest age, the organic fractions significantly increased. The labile P pool (inorganic + organic), which is considered to be the pool of P most likely to contribute to plant-available P, significantly decreased with forest age (from > 20 to < 10% of total P), except in the 0-5 cm of topsoil, where labile P remained persistently high. The shift from inorganic to organic P and the shifts between the different inorganic P fractions are driven by biological processes and also by physicochemical changes related to forest development. It is concluded that the organic labile P fraction, which is readily mineralisable, should be taken into account when studying the bioavailable P pool in forest ecosystems

Relative Importance of Climate, Soil and Plant Functional Traits During the Early Decomposition Stage of Standardized Litter

Climatic factors have long been considered predominant in controlling decomposition rates at large spatial scales. However, recent research suggests that edaphic factors and plant functional traits may play a more important role than previously expected. In this study, we investigated how biotic and abiotic factors interacted with litter quality by analyzing decomposition rates for two forms of standardized litter substitutes: green tea (high-quality litter) and red tea (low-quality litter). We placed 1188 teabags at two different positions (forest floor and 8 cm deep) across 99 forest sites in France and measured 46 potential drivers at each site. We found that high-quality litter decomposition was strongly related to climatic factors, whereas low-quality litter decomposition was strongly related to edaphic factors and the identity of the dominant tree species in the stand. This indicates that the relative importance of climate, soil and plant functional traits in the litter decomposition process depends on litter quality, which was the predominant factor controlling decomposition rate in this experiment. We also found that burying litter increased decomposition rates, and that this effect was more important for green tea in drier environments. This suggests that changes in position (surface vs. buried) at the plot scale may be as important as the role of macroclimate on decomposition rates because of varying water availability along the soil profile. Acknowledging that the effect of climate on decomposition depends on litter quality and that the macroclimate is not necessarily the predominant factor at large spatial scales is the first step toward identifying the factors regulating decomposition rates from the local scale to the global scale