2 research outputs found

    Phylogenetic trees of chelicerate relationships, inferred from nucleotide (upper) and amino acid (lower) datasets

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    <p><b>Copyright information:</b></p><p>Taken from "The complete mitochondrial genome of (Chelicerata: Ricinulei) and a comparison of mitochondrial gene rearrangements in Arachnida"</p><p>http://www.biomedcentral.com/1471-2164/8/386</p><p>BMC Genomics 2007;8():386-386.</p><p>Published online 25 Oct 2007</p><p>PMCID:PMC2231378.</p><p></p> All protein coding gene sequences were aligned and concatenated; ambiguously aligned regions were omitted by Gblocks. Trees were rooted with outgroup taxa (, , ). Topologies and branch lengths were taken from the best scoring trees of the maximum likelihood (ML) analyses. Numbers behind the branching points are percentages from ML bootstrapping (left), Bayesian posterior probabilities (BPP, middle) and maximum parsimony bootstrap percentages (MP, right). Stars indicate that values are 100 (ML), 1.0 (BI) and 100 (MP). See Table 2 for accession numbers

    Changes in gene order in mitochondrial genomes of Arachnida compared to the putative ancestral arthropod gene order

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    <p><b>Copyright information:</b></p><p>Taken from "The complete mitochondrial genome of (Chelicerata: Ricinulei) and a comparison of mitochondrial gene rearrangements in Arachnida"</p><p>http://www.biomedcentral.com/1471-2164/8/386</p><p>BMC Genomics 2007;8():386-386.</p><p>Published online 25 Oct 2007</p><p>PMCID:PMC2231378.</p><p></p> Transfer RNA genes are labelled according to the one letter amino acid code. Genes marked white show the same relative position as in the arthropod ground pattern; genes marked orange have relative positions differing from the arthropod ground pattern; the gene marked black indicates a duplicated gene in . Horizontal lines above genes illustrate adjacent genes which were probably translocated together; dotted lines indicate regions where tandem duplication and random deletion events may have occurred; connected arrows show adjacent genes which have switched their position, making it difficult to assess which gene was translocated. Braces accentuate the duplicated regions in the mitochondrial genome of . lnr: large non-coding region, putative mitochondrial control region; other non-coding regions (> 50 bp) are illustrated by gaps between genes. Numbers refer to rearrangement events, compare Fig. 6. For GenBank accession numbers see Table 2
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