Analysis of Phenolic Acids of Jerusalem Artichoke ( Helianthus tuberosus

Plant phenolics can have applications in pharmaceutical and other industries. To identify and quantify the phenolic compounds in Helianthus tuberosus leaves, qualitative analysis was performed by a reversed phase high-performance liquid chromatography coupled with tandem mass spectrometry (HPLC-MS/MS) and quantitative analysis by HPLC. Ten chlorogenic acids (CGAs) were identified (3-o-caffeoylquinic acid, two isomers of caffeoylquinic acid, caffeic acid, p-coumaroyl-quinic acid, feruloylquinic acid, 3,4-dicaffeoyquinic acid, 3,5-dicaffeoylquinic acid, 1,5-dicaffeoylquinic acid, and 4,5-dicaffeoylquinic acid) by comparing their retention times, UV-Vis absorption spectra, and MS/MS spectra with standards. In addition, four other phenolic compounds, including caffeoyl glucopyranose, isorhamnetin glucoside, kaempferol glucuronide, and kaempferol-3-o-glucoside, were tentatively identified in Helianthus tuberosus leaves for the first time. The 3-o-caffeoylquinic acid (7.752 mg/g DW), 4,5-dicaffeoylquinic acid (5.633 mg/g DW), and 3,5-dicaffeoylquinic acid (4.900 mg/g DW) were the major phenolic compounds in leaves of Helianthus tuberosus cultivar NanYu in maturity. The variations in phenolic concentrations and proportions in Helianthus tuberosus leaves were influenced by genotype and plant growth stage. Cultivar NanYu had the highest concentration of phenolic compounds, in particular 3-o-caffeoylquinic acid and 4,5-dicaffeoylquinic acid compared with the other genotypes (wild accession and QingYu). Considering various growth stages, the concentration of total phenolics in cultivar NanYu was higher at flowering stage (5.270 mg/g DW) than at budding and tuber swelling stages. Cultivar NanYu of Helianthus tuberosus is a potential source of natural phenolics that may play an important role in the development of pharmaceuticals

Transcriptomic analysis of Synechocystis sp PCC6803 under low-temperature stress

In this study, cDNA microarrays were developed from 3569 mRNA reads to analyze the expression profiles of the transcriptomes of Synechocystis sp. PCC6803 under low temperature (LT) stress. Among the genes on the cDNA microarrays, 899 LT-affected genes exhibited a 1.5-fold (or greater) difference in expression compared with the genes from normal unstressed Synechocystis sp. PCC6803. Of the differentially expressed genes, 353 were up-regulated and 246 were down-regulated. The results showed that genes involved in photosynthesis were activated at LT (10A degrees C), including genes for photosystem I, photosystem II, photosynthetic electron transport, and cytochrome b6/f complex. Moreover, desB, one of four genes that encode the fatty acid desaturases, was also induced by LT. However, the LT conditions to some degree enhanced the transcription of some genes. In addition, LT (10A degrees C) may reduce cellular motility by regulating the transcription of spkA (sll1575), a serine/threonine protein kinase. The results reported in this study may contribute to a better understanding of the responses of the Synechocystis cell to LT, including pathways involved in photosynthesis and repair.In this study, cDNA microarrays were developed from 3569 mRNA reads to analyze the expression profiles of the transcriptomes of Synechocystis sp. PCC6803 under low temperature (LT) stress. Among the genes on the cDNA microarrays, 899 LT-affected genes exhibited a 1.5-fold (or greater) difference in expression compared with the genes from normal unstressed Synechocystis sp. PCC6803. Of the differentially expressed genes, 353 were up-regulated and 246 were down-regulated. The results showed that genes involved in photosynthesis were activated at LT (10A degrees C), including genes for photosystem I, photosystem II, photosynthetic electron transport, and cytochrome b6/f complex. Moreover, desB, one of four genes that encode the fatty acid desaturases, was also induced by LT. However, the LT conditions to some degree enhanced the transcription of some genes. In addition, LT (10A degrees C) may reduce cellular motility by regulating the transcription of spkA (sll1575), a serine/threonine protein kinase. The results reported in this study may contribute to a better understanding of the responses of the Synechocystis cell to LT, including pathways involved in photosynthesis and repair

Gene cloning and expression profile of a novel carotenoid hydroxylase (CYP97C) from the green alga Haematococcus pluvialis

A full-length complementary DNA (cDNA) sequence of epsilon-ring CHY (designated Haecyp97c) was cloned from the green alga Haematococcus pluvialis by reverse transcription polymerase chain reaction (RT-PCR) and rapid amplification of cDNA ends methods. The Haecyp97c cDNA sequence was 1,995 base pairs (bp) in length, which contained a 1,620-bp open reading frame, a 46-bp 5'-untranslated region (UTR), and a 329-bp 3'-UTR with the characteristic of the poly (A) tail. The deduced protein had a calculated molecular mass of 58.71 kDa with an estimated isoelectric point of 7.94. Multiple alignment analysis revealed that the deduced amino acid sequence of HaeCYP97C shared high identity of 72-85 % with corresponding CYP97Cs from other eukaryotes. The catalytic motifs of cytochrome P450s were detected in the amino acid sequence of HaeCYP97C. The transcriptional levels of Haecyp97c and xanthophylls accumulation under high light (HL) stress have been examined. The results revealed that Haecyp97c transcript was strongly increased after 13-28 h under HL stress. Meanwhile, the concentrations of chlorophylls, carotenes, and lutein were decreased, and zeaxanthin and astaxanthin concentrations were increased rapidly, respectively. These facts indicated that HaeCYP97C was perhaps involved in xanthophyll biosynthesis, which plays an important role in adaption to HL for H. pluvialis.A full-length complementary DNA (cDNA) sequence of epsilon-ring CHY (designated Haecyp97c) was cloned from the green alga Haematococcus pluvialis by reverse transcription polymerase chain reaction (RT-PCR) and rapid amplification of cDNA ends methods. The Haecyp97c cDNA sequence was 1,995 base pairs (bp) in length, which contained a 1,620-bp open reading frame, a 46-bp 5'-untranslated region (UTR), and a 329-bp 3'-UTR with the characteristic of the poly (A) tail. The deduced protein had a calculated molecular mass of 58.71 kDa with an estimated isoelectric point of 7.94. Multiple alignment analysis revealed that the deduced amino acid sequence of HaeCYP97C shared high identity of 72-85 % with corresponding CYP97Cs from other eukaryotes. The catalytic motifs of cytochrome P450s were detected in the amino acid sequence of HaeCYP97C. The transcriptional levels of Haecyp97c and xanthophylls accumulation under high light (HL) stress have been examined. The results revealed that Haecyp97c transcript was strongly increased after 13-28 h under HL stress. Meanwhile, the concentrations of chlorophylls, carotenes, and lutein were decreased, and zeaxanthin and astaxanthin concentrations were increased rapidly, respectively. These facts indicated that HaeCYP97C was perhaps involved in xanthophyll biosynthesis, which plays an important role in adaption to HL for H. pluvialis

Innovative Artificial Agro-Ecosystems Enhance Soil Carbon Sequestration in Coastal Zones of Southeast China

Tidal flats, which are important reserved land resources, have a vital role in climate change. To evaluate the contribution of coastal saline soils to carbon sequestration, field tests were performed over a 3 year period at the Dafeng Wanggang Experimental Station in Jiangsu Province, China. Six artificial agro-ecosystems, including wasteland (WL), freshwater fish culture (FC), Sesbania culture (SC), barley culture (BC), mixed culture of fish and Sesbania (MCFS) and mixed culture of fish and barley (MCFB), were established according to developmental processes of coastal saline soils. At the initial stage of tidal flat reclamation, the soil organic carbon (SOC) increased by 59.4tha-1 in the FC system during 3 years, which was much higher than that of the WL system (40.7tha-1). When the tidal flats evolved into high saline soils, the MCFS system sequestered SOC more effectively than the FC or SC systems with increases of 53.1, 16.9 and 8.3tha-1, respectively. Subsequently, in the low saline soils, the maximum soil carbon sequestration was obtained in the MCFB system (35.8tha-1) followed by the BC (17.5tha-1) and FC (13.5tha-1) systems. Therefore, proper development of tidal flats to farmland and the subsequent establishment of optimised artificial agro-ecosystems make an important contribution to carbon sequestration and climate changes in coastal areas.Tidal flats, which are important reserved land resources, have a vital role in climate change. To evaluate the contribution of coastal saline soils to carbon sequestration, field tests were performed over a 3 year period at the Dafeng Wanggang Experimental Station in Jiangsu Province, China. Six artificial agro-ecosystems, including wasteland (WL), freshwater fish culture (FC), Sesbania culture (SC), barley culture (BC), mixed culture of fish and Sesbania (MCFS) and mixed culture of fish and barley (MCFB), were established according to developmental processes of coastal saline soils. At the initial stage of tidal flat reclamation, the soil organic carbon (SOC) increased by 59.4tha-1 in the FC system during 3 years, which was much higher than that of the WL system (40.7tha-1). When the tidal flats evolved into high saline soils, the MCFS system sequestered SOC more effectively than the FC or SC systems with increases of 53.1, 16.9 and 8.3tha-1, respectively. Subsequently, in the low saline soils, the maximum soil carbon sequestration was obtained in the MCFB system (35.8tha-1) followed by the BC (17.5tha-1) and FC (13.5tha-1) systems. Therefore, proper development of tidal flats to farmland and the subsequent establishment of optimised artificial agro-ecosystems make an important contribution to carbon sequestration and climate changes in coastal areas

Use of saline aquaculture wastewater to irrigate salt-tolerant Jerusalem artichoke and sunflower in semiarid coastal zones of China

In 2004 and 2005, the feasibility of agricultural use of saline aquaculture wastewater for irrigation of Jerusalem artichoke and sunflower was conducted in the Laizhou region using saline aquaculture wastewater mixed with brackish groundwater at different ratios. Six treatments with different electrical conductivities (EC) were included in the experiment: CK1 (rainfed), CK2 (irrigation with freshwater, EC of 0.02 dS m-1), and saline aquaculture wastewater (EC of 39.2 dS m-1) mixed with brackish groundwater (EC of 4.4 dS m-1) at volumetric ratios of 1:1, 1:2, 1:3, and 1:4 with corresponding EC of 22.0, 16.1, 13.2, and 11.4 dS m-1. Soil electrical conductivity (ECe) in the saline aquaculture wastewater irrigation treatments was significantly higher (P Jerusalem artichoke Sunflower Saline aquaculture wastewater irrigation Yield Nutrient removal

Gene Regulation of Iron-Deficiency Responses Is Associated with Carbon Monoxide and Heme Oxydase 1 in Chlamydomonas reinhardtii

Carbon monoxide (CO) as an endogenous gaseous molecule regulates a variety of biological processes in animals. However, CO regulating nutrient stress responses in green alga is largely unknown. On the other hand, heme oxydase (HO1 as a rate-limiting enzyme of the first step for heme degration and to catalyze heme into biliverdin (BV), which is concomitant with releasing of CO and ferrous ions, probably participates in the process of CO-regulating response to nutrient stress in green alga. In this paper, we described an observation that CO could regulate iron-homeostasis in iron-starving Chlamydomonas reinhardtii. Exogenous CO at 8 mu M was able to prevent the iron deficient-inducing chlorosis and improve chlorophyll accumulation. Expression pattern of FOX1, FTR1 and ferredoxin was up-regulated by CO exposure in iron-deficient mediam. treatment with external CO increasing iron accumulation in iron-deficient C. reinhardtii. Moreover, to get insights into the regulatory role of HO1, we constructed a transgenic alga overexpressing HO1 and HO1 knock-out mutants. The results show that there was no significant influence on chlorosis with HO1 overexpression of C. reinhardtii under iron-deficiency and the chlorophyll accumulation, and gene expression associated with iron deficiency of mutant were greatly improved. Otherwise, those results from HO1 knock-out mutants were opposite to HO1 overexpression mutants. Finally, CO exposure induced NO accumulation in cells. However, such an action could be blocked by NO scavenger cPTIO. These results indicate that CO/HO1 may play an important role in improving green algae adaptation to iron deficiency or cross-talking with NO under the iron deficiency.Carbon monoxide (CO) as an endogenous gaseous molecule regulates a variety of biological processes in animals. However, CO regulating nutrient stress responses in green alga is largely unknown. On the other hand, heme oxydase (HO1 as a rate-limiting enzyme of the first step for heme degration and to catalyze heme into biliverdin (BV), which is concomitant with releasing of CO and ferrous ions, probably participates in the process of CO-regulating response to nutrient stress in green alga. In this paper, we described an observation that CO could regulate iron-homeostasis in iron-starving Chlamydomonas reinhardtii. Exogenous CO at 8 mu M was able to prevent the iron deficient-inducing chlorosis and improve chlorophyll accumulation. Expression pattern of FOX1, FTR1 and ferredoxin was up-regulated by CO exposure in iron-deficient mediam. treatment with external CO increasing iron accumulation in iron-deficient C. reinhardtii. Moreover, to get insights into the regulatory role of HO1, we constructed a transgenic alga overexpressing HO1 and HO1 knock-out mutants. The results show that there was no significant influence on chlorosis with HO1 overexpression of C. reinhardtii under iron-deficiency and the chlorophyll accumulation, and gene expression associated with iron deficiency of mutant were greatly improved. Otherwise, those results from HO1 knock-out mutants were opposite to HO1 overexpression mutants. Finally, CO exposure induced NO accumulation in cells. However, such an action could be blocked by NO scavenger cPTIO. These results indicate that CO/HO1 may play an important role in improving green algae adaptation to iron deficiency or cross-talking with NO under the iron deficiency

A Comparison Effect of Copper Nanoparticles versus Copper Sulphate on Juvenile Epinephelus coioides: Growth Parameters, Digestive Enzymes, Body Composition, and Histology as Biomarkers

Copper nanoparticles (Cu-NPs) are components in numerous commercial products, but little is known about their potential hazard in the marine environments. In this study the effects of Cu-NPs and soluble Cu on juvenile Epinephelus coioides were investigated. The fish were exposed in triplicate to control, 20 or 100 µg Cu L−1 as either copper sulphate (CuSO4) or Cu-NPs for 25 days. The growth performance decreased with increasing CuSO4 or Cu-NPs dose, more so in the CuSO4 than Cu-NPs treatment. Both forms of Cu exposure inhibited activities of digestive enzymes (protease, amylase, and lipase) found in liver, stomach, and intestine. With an increase in CuSO4 and Cu-NPs dose, crude protein and crude lipid decreased, but ash and moisture increased, more so in the CuSO4 than Cu-NPs treatment. The Cu-NPs treatment caused pathologies in liver and gills, and the kinds of pathologies were broadly of the same type as with CuSO4. With an increase in CuSO4 or Cu-NPs dose, the total polyunsaturated fatty acids decreased, but total monounsaturated fatty acids and total saturated fatty acids increased compared to control. Overall, these data showed that Cu-NPs had a similar type of toxic effects as CuSO4, but soluble Cu was more toxic than Cu-NPs

Characterization of marine Pseudomonas spp. antagonist towards three tuber-rotting fungi from Jerusalem artichoke, a new industrial crop

The aim of this study was the isolation, characterization, and selection of Pseudomonas spp. with antagonistic activity against Jerusalem artichoke tuber rot disease during storage. Ten pathogenic fungi were isolated from rotting tubers and classified in seven genera based on morphology and the part sequences in the ITS analysis. The marine Pseudomonas spp. strain JK2, isolated from mud in South China Sea, exhibited high antifungal activity against Aspergillus tamari (M10), Fusarium solani (M9), and Aspergillus fumigatus (M2). JK2 was identified as Pseudomonas spp. based on morphological, physiological and biochemical methods as well as 16S rDNA analysis. Seven days after inoculation the radii of the inhibition zone (mm) of M2, MO and M10 were 10.5 +/- 1.2, 6.5 +/- 0.15, and 13.0 +/- 0.75, respectively, compared to the sterilized medium as control. Transmission electron microscopy showed that, compared with the normal hyphae, the fungal hyphae treated with strain JK2 had injury in the cell wall. Thus, JK2 had a significant fungicidal effect on the three pathogenic fungi. To our best knowledge, this is the first report of biocontrol agent for storage disease of Jerusalem artichoke. 2012 Elsevier B.V. All rights reserved.The aim of this study was the isolation, characterization, and selection of Pseudomonas spp. with antagonistic activity against Jerusalem artichoke tuber rot disease during storage. Ten pathogenic fungi were isolated from rotting tubers and classified in seven genera based on morphology and the part sequences in the ITS analysis. The marine Pseudomonas spp. strain JK2, isolated from mud in South China Sea, exhibited high antifungal activity against Aspergillus tamari (M10), Fusarium solani (M9), and Aspergillus fumigatus (M2). JK2 was identified as Pseudomonas spp. based on morphological, physiological and biochemical methods as well as 16S rDNA analysis. Seven days after inoculation the radii of the inhibition zone (mm) of M2, MO and M10 were 10.5 +/- 1.2, 6.5 +/- 0.15, and 13.0 +/- 0.75, respectively, compared to the sterilized medium as control. Transmission electron microscopy showed that, compared with the normal hyphae, the fungal hyphae treated with strain JK2 had injury in the cell wall. Thus, JK2 had a significant fungicidal effect on the three pathogenic fungi. To our best knowledge, this is the first report of biocontrol agent for storage disease of Jerusalem artichoke. 2012 Elsevier B.V. All rights reserved