30,346 research outputs found
Nā²-(Propan-2-ylĀidene)nicotinohydrazide
Crystals of the title compound, C9H11N3O, were obtained from a condensation reaction of nicotinohydrazide and acetone. In the molĀecular structure, the pyridine ring is oriented at a dihedral angle of 36.28ā
(10)Ā° with respect to the amide plane. In the crystal structure, molĀecules are linked via NāHāÆO hydrogen bonds, forming chains
Protein Evolution in Yeast Transcription Factor Subnetworks
When averaged over the full yeast proteināprotein interaction and transcriptional regulatory networks, protein hubs with many interaction partners or regulators tend to evolve significantly more slowly due to increased negative selection. However, genome-wide analysis of protein evolution in the subnetworks of associations involving yeast transcription factors (TFs) reveals that TF hubs do not tend to evolve significantly more slowly than TF non-hubs. This result holds for all four major types of TF hubs: interaction hubs, regulatory in-degree and out-degree hubs, as well as co-regulatory hubs that jointly regulate target genes with many TFs. Furthermore, TF regulatory in-degree hubs tend to evolve significantly more quickly than TF non-hubs. Most importantly, the correlations between evolutionary rate (KA/KS) and degrees for TFs are significantly more positive than those for generic proteins within the same global proteināprotein interaction and transcriptional regulatory networks. Compared to generic protein hubs, TF hubs operate at a higher level in the hierarchical structure of cellular networks, and hence experience additional evolutionary forces (relaxed negative selection or positive selection through network rewiring). The striking difference between the evolution of TF hubs and generic protein hubs demonstrates that components within the same global network can be governed by distinct organizational and evolutionary principles.National Natural Science Foundation of China (10801131, 10631070); National Science Foundation (DGE-0654108); Pharmaceutical Research and Manufacturers of America Foundation (Research Starter Grant in Informatics); K. C. Wong Education Foundatio
BL-MNE: Emerging Heterogeneous Social Network Embedding through Broad Learning with Aligned Autoencoder
Network embedding aims at projecting the network data into a low-dimensional
feature space, where the nodes are represented as a unique feature vector and
network structure can be effectively preserved. In recent years, more and more
online application service sites can be represented as massive and complex
networks, which are extremely challenging for traditional machine learning
algorithms to deal with. Effective embedding of the complex network data into
low-dimension feature representation can both save data storage space and
enable traditional machine learning algorithms applicable to handle the network
data. Network embedding performance will degrade greatly if the networks are of
a sparse structure, like the emerging networks with few connections. In this
paper, we propose to learn the embedding representation for a target emerging
network based on the broad learning setting, where the emerging network is
aligned with other external mature networks at the same time. To solve the
problem, a new embedding framework, namely "Deep alIgned autoencoder based
eMbEdding" (DIME), is introduced in this paper. DIME handles the diverse link
and attribute in a unified analytic based on broad learning, and introduces the
multiple aligned attributed heterogeneous social network concept to model the
network structure. A set of meta paths are introduced in the paper, which
define various kinds of connections among users via the heterogeneous link and
attribute information. The closeness among users in the networks are defined as
the meta proximity scores, which will be fed into DIME to learn the embedding
vectors of users in the emerging network. Extensive experiments have been done
on real-world aligned social networks, which have demonstrated the
effectiveness of DIME in learning the emerging network embedding vectors.Comment: 10 pages, 9 figures, 4 tables. Full paper is accepted by ICDM 2017,
In: Proceedings of the 2017 IEEE International Conference on Data Mining
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