Additional file 1 of Vertical transmission of gut bacteria in commercial chickens is limited

Additional file 1. Figure S1: Correlation between transmission score and relative abundance in chick fecal samples; Figure S2: Heatmap of the dominant ASV in each sample; Figure S3: Cumulative relative abundance of ASVs in hens, binned by their transmission scores in chicks; Figure S4: Relative abundance of the three efficiently transmitted ASVs in treated and untreated hens and chicks; Figure S5: Effect of disinfection on the bacterial load of eggshell surfaces; Figure S6: Antibiotic treatment disrupts hen microbiota; and Figure S7: PCoAs using Jaccard index of treated vs. untreated chicks of the same round in each time point