1 research outputs found
A Color-Determining Amino Acid Residue of Proteorhodopsin
Proteorhodopsin (PR) is a light-driven
proton pump found in marine
bacteria. More than 1000 PRs are classified as blue-absorbing (λ<sub>max</sub> ∼ 490 nm) and green-absorbing (λ<sub>max</sub> ∼ 525 nm) PRs. The color determinant is known to be at position
105, where blue-absorbing and green-absorbing PRs possess Gln and
Leu, respectively. This suggests hydrophobicity at position 105 plays
a key role in color tuning. Here we successfully introduced 19 amino
acid residues into position 105 of green-absorbing PR in the membrane
environment and investigated the absorption properties. High-performance
liquid chromatography analysis shows that the isomeric composition
of the all-<i>trans</i> form is >70% for all mutants,
indicating
little influence of different isomers on color tuning. Absorption
spectra of the wild-type and 19 mutant proteins were well-characterized
by the pH-dependent equilibria of the protonated and deprotonated
counterion (Asp97) of the Schiff base, whereas the λ<sub>max</sub> values of these two states and the p<i>K</i><sub>a</sub> value differed significantly among mutants. Although Gln and Leu
are hydrophilic and hydrophobic residues, respectively, the λ<sub>max</sub> values of the two states and the p<i>K</i><sub>a</sub> value did not correlate with the hydropathy index of residues.
In contrast, the λ<sub>max</sub> and p<i>K</i><sub>a</sub> were correlated with the volume of residues, though Gln and
Leu possess similar volumes. This observation concludes that the λ<sub>max</sub> and p<i>K</i><sub>a</sub> of Asp97 are determined
by local and specific interactions in the Schiff base moiety, in which
the volume of the residue at position 105 is more influential than
its hydrophobicity. We suggest that the hydrogen-bonding network in
the Schiff base moiety plays a key role in the λ<sub>max</sub> and p<i>K</i><sub>a</sub> of Asp97, and the hydrogen-bonding
network is significantly perturbed by large amino acid residues but
may be preserved by additional water molecule(s) for small amino acid
residues at position 105