The Magnetic Properties of Closely Spaced Three-Dimensional Nanomagnet Array

With Monte Carlo method, we investigate the magnetic ground state, magnetic specific heat, and magnetic hysteresis loop for three types of closely spaced nanomagnet arrays in three-dimensional (3D) space. It is found that the magnetic ground state of three nanomagnet arrays exhibits the vortex order, caused by the long-range dipolar interactions. Three types of nanomagnet arrays have almost the same magnetic transition temperature even if their array formation in 3D triangular lattice is different. Some slight jump occurs in the hysteresis loop of the face-centered cubic nanomagnet array, while for the simple hexagonal nanomagnet and close-packed hexagonal nanomagnet arrays no jump is found

A Highly Selective Colorimetric Sensor for Cysteine in Water Solution and Bovine Serum Albumin

A simple colorimetric sensor, 2-bromonaphthalene-1,4-dione, has been developed for the Cysteine detection. The sensor showed its best performance in a mixture of ethanol and HEPES (5 : 5, v/v) solution at pH of 7.0. The results of UV-vis and fluorescence indicated that 2-bromonaphthalene-1,4-dione was selective and sensitive for Cysteine detection without the interference of other amino acids (Cysteine, Alanine, Arginine, Aspartinie, Glutamine, Glycine, Histidine, Isoleucine, Leucine, Lysine, Methionine, Proline, Serine, Threonine, Phenylalanine, Valine, Tryptophan, and Hydroxyproline). 2-Bromonaphthalene-1,4-dione also showed binding ability for Cysteine in bovine serum albumin and could be used as a potential colorimetric sensor among eighteen kinds of natural amino acids. Importantly, the recognition of CySH could be observed by naked eye

Association between platelet distribution width and serum uric acid in Chinese population

© 2019 International Union of Biochemistry and Molecular Biology Platelet distribution width (PDW) is a simple and inexpensive parameter, which could predict activation of coagulation efficiently. And it has been confirmed to have a significant role in many diseases. We aimed to explore the association between PDW and hyperuricemia in a large Chinese cohort. This cross-sectional study recruited 61,091 ostensible healthy participants (29,259 males and 31,832 females) after implementing exclusion criteria. Clinical data of the enrolled population included anthropometric measurements and serum parameters. Database was sorted by gender, and the association between PDW and hyperuricemia was analyzed after dividing PDW into quartiles. Crude and adjusted odds ratios of PDW for hyperuricemia with 95% confidence intervals were analyzed using binary logistic regression models. We found no significant difference in PDW values between the genders. Males showed significantly higher incidence of hyperuricemia than females. From binary logistic regression models, significant hyperuricemia risks only were demonstrated in PDW quartiles 2 and 3 in males (P < 0.05). This study displayed close association between PDW and hyperuricemia as a risk factor. It is meaningful to use PDW as a clinical risk predictor for hyperuricemia in males. © 2019 BioFactors, 45(3):326–334, 2019

Phage combination alleviates bacterial leaf blight of rice (Oryza sativa L.)

Rice bacterial leaf blight (BLB) is the most destructive bacterial diseases caused by Xanthomonas oryzae pv. oryzae (Xoo). Phages have been proposed as a green and efficient strategy to kill bacterial pathogens in crops, however, the mechanism of action of phages in the control of phyllosphere bacterial diseases remain unclear. Here, the glasshouse pot experiment results showed that phage combination could reduce the disease index by up to 64.3%. High-throughput sequencing technology was used to analyze the characteristics of phyllosphere microbiome changes and the results showed that phage combinations restored the impact of pathogen invasion on phyllosphere communities to a certain extent, and increased the diversity of bacterial communities. In addition, the phage combination reduced the relative abundance of epiphytic and endophytic Xoo by 58.9% and 33.9%, respectively. In particular, Sphingomonas and Stenotrophomonas were more abundant. According to structural equation modeling, phage combination directly and indirectly affected the disease index by affecting pathogen Xoo biomass and phage resistance. In summary, phage combination could better decrease the disease index. These findings provide new insights into phage biological control of phyllosphere bacterial diseases, theoretical data support, and new ideas for agricultural green prevention and control of phyllosphere diseases

Functional Analysis of the Two Brassica AP3 Genes Involved in Apetalous and Stamen Carpelloid Phenotypes

The Arabidopsis homeotic genes APETALA3 (AP3) and PISTILLATA (PI) are B genes which encode MADS-box transcription factors and specify petal and stamen identities. In the current study, the stamen carpelloid (SC) mutants, HGMS and AMS, of B. rapa and B. napus were investigated and two types of AP3 genes, B.AP3.a and B.AP3.b, were functional characterized. B.AP3.a and B.AP3.b share high similarity in amino acid sequences except for 8 residues difference located at the C-terminus. Loss of this 8 residues in B.AP3.b led to the change of PI-derived motifs. Meanwhile, B.AP3.a specified petal and stamen development, whereas B.AP3.b only specified stamen development. In B. rapa, the mutations of both genes generated the SC mutant HGMS. In B. napus that contained two B.AP3.a and two B.AP3.b, loss of the two B.AP3.a functions was the key reason for the apetalous mutation, however, the loss-of-function in all four AP3 was related to the SC mutant AMS. We inferred that the 8 residues or the PI-derived motif in AP3 gene probably relates to petal formation

Is 3D modelling necessary for simulating long-duration urban flooding？

editorial reviewedUrban flood modeling within complex urban environments demands sophisticated methodologies. While 2D computational models have historically served as foundational tools, their inherent limitations in capturing the intricate three-dimensional dynamics necessitate further exploration. Our research endeavors to expand this understanding by delving into 3D computational simulations, providing a more holistic perspective on urban flood dynamics. In the current research, we conducted 3D simulations to replicate urban flood processes, drawing comparisons with earlier 2D modeling results and experimental observations. The simulations were executed considering various urban layouts and turbulence closure models. The urban layouts include two groups, totaling 13 architectural models. These models feature varying numbers or positions of openings on their exterior walls to represent architectural elements such as doors and windows that could allow floodwaters to enter in the interior of the buildings. As for the turbulence equations, k-omega SST and k-epsilon were considered. By analyzing the surface velocity, flow depth, and flowrate distribution, preliminary findings indicate that 3D simulations offer enhanced accuracy in capturing intricate flow patterns within urban settings compared to their 2D counterparts. Moreover, the tested simulations from various turbulence models influence the 2D and 3D simulations in different ways. This direct comparison allowed us to dissect and understand the influence of turbulence modeling on the accuracy of 3D simulations, thereby enhancing the robustness of our findings. After obtaining the relevant results, we applied them to flood risk analysis. Compared to traditional 2D analyses, we derived some new insights to guide informed decision-making, enhancing the applicability of our approach. By integrating sophisticated modeling techniques and risk evaluations, this study paves the way for more resilient and adaptive urban planning strategies, ensuring safer and more sustainable urban environments in the face of increasing flood challenges

Anthocyanin Biosynthesis Induced by MYB Transcription Factors in Plants

Anthocyanins act as polyphenolic pigment that is ubiquitously found in plants. Anthocyanins play a role not only in health-promoting as an antioxidant, but also in protection against all kinds of abiotic and biotic stresses. Most recent studies have found that MYB transcription factors (MYB TFs) could positively or negatively regulate anthocyanin biosynthesis. Understanding the roles of MYB TFs is essential in elucidating how MYB TFs regulate the accumulation of anthocyanin. In the review, we summarized the signaling pathways medicated by MYB TFs during anthocyanin biosynthesis including jasmonic acid (JA) signaling pathway, cytokinins (CKs) signaling pathway, temperature-induced, light signal, 26S proteasome pathway, NAC TFs, and bHLH TFs. Moreover, structural and regulator genes induced by MYB TFs, target genes bound and activated or suppressed by MYB TFs, and crosstalk between MYB TFs and other proteins, were found to be vitally important in the regulation of anthocyanin biosynthesis. In this study, we focus on the recent knowledge concerning the regulator signaling and mechanism of MYB TFs on anthocyanin biosynthesis, covering the signaling pathway, genes expression, and target genes and protein expression