Partial sex linkage and linkage disequilibrium on the guppy sex chromosome

The guppy Y chromosome has been considered a model system for the evolution of suppressed recombination between sex chromosomes, and it has been proposed that complete sex‐linkage has evolved across about 3 Mb surrounding this fish's sex‐determining locus, followed by recombination suppression across a further 7 Mb of the 23 Mb XY pair, forming younger “evolutionary strata”. Sequences of the guppy genome show that Y is very similar to the X chromosome. Knowing which parts of the Y are completely nonrecombining, and whether there is indeed a large completely nonrecombining region, are important for understanding its evolution. Here, we describe analyses of PoolSeq data in samples from within multiple natural populations from Trinidad, yielding new results that support previous evidence for occasional recombination between the guppy Y and X. We detected recent demographic changes, notably that downstream populations have higher synonymous site diversity than upstream ones and other expected signals of bottlenecks. We detected evidence of associations between sequence variants and the sex‐determining locus, rather than divergence under a complete lack of recombination. Although recombination is infrequent, it is frequent enough that associations with SNPs can suggest the region in which the sex‐determining locus must be located. Diversity is elevated across a physically large region of the sex chromosome, conforming to predictions for a genome region with infrequent recombination that carries one or more sexually antagonistic polymorphisms. However, no consistently male‐specific variants were found, supporting the suggestion that any completely sex‐linked region may be very small

Stability of stope structure under different mining methods

The ore body has a great influence on the stability of surrounding rock and mining safety under different mining modes, and the reasonable selection of mining mode depends on other characteristics, such as ore structure surface feature, rock mass mechanical property, and ground stress distribution. Given the insufficient mining research data, this study establishes a 3D model by using the FLAC3D calculation program. Through numerical simulation and other technical means, a preliminary study on plastic and minimum stress changes during horizontal pillar mining, stress changes under different mining modes, and the effect comparison of full filling mining modes is conducted. Results show that the surrounding rock at the corner of pillar 1 is damaged, the plastic zone decreases, and the minimum stress in each working procedure increases slightly. The area of the plastic zone in alternate mining is smaller to that in continuous mining. This study provides a theoretical basis for ore body mining

Has recombination changed during the recent evolution of the guppy Y chromosome?

Genome sequencing and genetic mapping of molecular markers have demonstrated nearly complete Y-linkage across much of the guppy (Poecilia reticulata) XY chromosome pair. Predominant Y-linkage of factors controlling visible male-specific coloration traits also suggested that these polymorphisms are sexually antagonistic (SA). However, occasional exchanges with the X are detected, and recombination patterns also appear to differ between natural guppy populations, suggesting ongoing evolution of recombination suppression under selection created by partially sex-linked SA polymorphisms. We used molecular markers to directly estimate genetic maps in sires from four guppy populations. The maps are very similar, suggesting that their crossover patterns have not recently changed. Our maps are consistent with population genomic results showing that variants within the terminal 5 Mb of the 26.5 Mb sex chromosome, chromosome 12, are most clearly associated with the maleness factor, albeit incompletely. We also confirmed occasional crossovers proximal to the male-determining region, defining a second, rarely recombining, pseudo-autosomal region, PAR2. This fish species may therefore have no completely male-specific region (MSY) more extensive than the male-determining factor. The positions of the few crossover events suggest a location for the male-determining factor within a physically small repetitive region. A sex-reversed XX male had few crossovers in PAR2, suggesting that this region’s low crossover rate depends on the phenotypic, not the genetic, sex. Thus, rare individuals whose phenotypic and genetic sexes differ, and/or occasional PAR2 crossovers in males can explain the failure to detect fully Y-linked variants

Stretchable and transparent hydrogels as soft conductors for dielectric elastomer actuators

A soft ionic conductor can serve as an artificial nerve in an artificial muscle. A polyacrylamide hydrogel is synthesized containing a hygroscopic salt, lithium chloride. Two layers of the hydrogel are used as ionic conductors to sandwich a dielectric elastomer and fabricate a highly stretchable and transparent actuator. When the two layers of the hydrogels are subject to a voltage, the actuator reduces its thickness and expands. An areal strain of 134% is demonstrated. The voltage-strain curves are calculated by using a model that accounts for the elastic constraint of the hydrogel and the inhomogeneous deformation of the actuator. For actuators fabricated with the hydrogel of various thicknesses and with the dielectric elastomer of various prestretches, excellent agreements are found between experimental data and theoretical predictions.Engineering and Applied Science

Highly Stretchable and Transparent Ionogels as Nonvolatile Conductors for Dielectric Elastomer Transducers

Large deformation of soft materials is harnessed to provide functions in the nascent field of soft machines. This paper describes a new class of systems enabled by highly stretchable, transparent, stable ionogels. We synthesize an ionogel by polymerizing acrylic acid in ionic liquid 1-ethyl-3-methylimidazolium ethylsulfate ([C2mim][EtSO4]). The ionogel exhibits desired attributes of adequate conductivity (0.22 S m−1), low elastic modulus (∼3 kPa), large rupturing stretch (∼4.6), and negligible hysteresis and degradation after cyclic stretches of large amplitude. Using the ionogel and a dielectric elastomer, we fabricate electromechanical transducers that achieve a voltage-induced areal strain of 140%. The ionogel is somewhat hygroscopic, but the transducers remain stable after a million cycles of excitation in a dry oven and in air. The transparency of the ionogels enable the transducers with conductors placed in the path of light, and the nonvolatility of the ionogels enable the transducers to be used in open air.Engineering and Applied Science

Ejecta-circumstellar medium interaction in high-density environment contribution to kilonova emission: Application to GRB 191019A

The nearby long-duration GRB 191019A recently detected by Swift lacks an associated supernova and belongs to a host galaxy with little star formation activity, suggesting that the origin of this burst is the result of a merger of two compact objects with dynamical interactions in a high-density medium of an active galactic nucleus. Given the potential motivation of this event, and given that it occurs in such a high-density environment, the ejecta-circumstellar medium (CSM) interaction cannot be ignored as possibly contributing to the kilonova emission. Here, we theoretically calculate the kilonova emission by considering the contribution of the ejecta-CSM interaction in a high-density environment. We find that the contribution to the kilonova emission from the ejecta-CSM interaction will dominate at a later time, and a smaller ejecta mass will have a stronger kilonova emission from the ejecta-CSM interaction. Moreover, we try to apply it to GRB 191019A, but we find that it is difficult to identify the possible kilonova emission from the observations, due to the contribution of the bright host galaxy. On the other hand, less injected mass (less than $M_{\rm ej}=2\times10^{-5}M_{\odot}$) will be required if one can detect the kilonova emission associated with a GRB 191019A-like event in the future. The {\em r}-process-powered and spin energy contributions from the magnetar are also discussed.Comment: 10 pages, 6 figures, updated the rederence list. ApJ in press, and matched with the published veriso

Evaluation of Toxoplasma gondii as a live vaccine vector in susceptible and resistant hosts

<p>Abstract</p> <p>Background</p> <p><it>Toxoplasma gondii </it>has been shown to trigger strong cellular immune responses to heterologous antigens expressed by the parasite in the inbred mouse model <abbrgrp><abbr bid="B1">1</abbr></abbrgrp>. We studied the immune response induced by <it>T. gondii </it>as an effective vaccine vector in chickens and rabbits.</p> <p>Results</p> <p><it>T. gondii </it>RH strain was engineered to express the yellow fluorescent protein (YFP) in the cytoplasm. A subcutaneous injection of the transgenic <it>T. gondii </it>YFP in chickens afforded partial protection against the infection of transgenic <it>E. tenella </it>YFP. <it>T. gondii </it>YFP induced low levels of antibodies to YFP in chickens, suggesting that YFP specific cellular immune response was probably responsible for the protective immunity against <it>E. tenella </it>YFP infection. The measurement of T-cell response and IFN-γ production further confirmed that YFP specific Th1 mediated immune response was induced by <it>T. gondii </it>YFP in immunized chickens. The transgenic <it>T. gondii </it>stimulated significantly higher YFP specific IgG titers in rabbits than in chickens, suggesting greater immunogenicity in a <it>T. gondii </it>susceptible species than in a resistant species. Priming with <it>T. gondii </it>YFP and boosting with the recombinant YFP can induce a strong anti-YFP antibody response in both animal species.</p> <p>Conclusions</p> <p>Our findings suggest that <it>T. gondii </it>can be used as an effective vaccine vector and future research should focus on exploring avirulent no cyst-forming strains of <it>T. gondii </it>as a live vaccine vector in animals.</p

Origin and Evolution of the Ore-Forming Fluids in the Liyuan Gold Deposit, Central North China Craton: Constraints from Fluid Inclusions and H-O-C Isotopic Compositions

The Liyuan gold deposit is hosted within Archean basement metamorphic rocks and controlled by the NNE-trending faults in the central North China Craton. The ore-forming processes can be divided into three stages (early, middle, and late). Three types of primary fluid inclusions (FIs) are identified in the Liyuan, including pure carbonic, carbonic-aqueous, and aqueous inclusions. The primary FIs of three stages are mainly homogenized at temperatures of 318–408°C, 201–329°C, and 136–229°C, with salinities of 2.1–8.9, 0.5–12.4, and 0.4–6.3 wt.% NaCl equivalent, respectively. The main Au mineralization is related to the middle stage, and water-rock interaction caused rapid precipitation of gold in this stage. The initial ore-forming fluids were likely magmatic water or metamorphic fluid and mixed with meteoric water at later stages. Due to the lack of granite body at the present mining levels, we speculate that it was magmatic water that might have been exsolved from a concealed granite body at greater depth or it was metamorphic fluid that was directly transported from depth via deep faults. Based on all the available geological and geochemical evidence, we suggest that the Liyuan deposit belongs to orogenic gold deposit that located in the interior North China Craton

Time-Course of the Effects of QSYQ in Promoting Heart Function in Ameroid Constrictor-Induced Myocardial Ischemia Pigs

We aim to investigate the therapeutic effects of QSYQ on a pig myocardial ischemia (MI) model and to determine its mechanism of action. The MI model was induced by Ameroid constriction of the left anterior descending coronary (LAD) in Ba-Ma miniature pigs. Four groups were created: model group, digoxin group, QSYQ group, and sham-operated group. Heart function, Ang II, CGMP, TXB2, BNP, and cTnT were evaluated before (3 weeks after operation: 0 weeks) and at 2, 4, and 8 weeks after drug administration. After 8 weeks of administration, the pigs were sacrificed for cardiac injury measurements. Pigs with MI showed obvious histological changes, including BNP, cTnT, Ang II, CGRP, TXB2, and ET, deregulated heart function, and increased levels of apoptotic cells in myocardial tissue. Treatment with QSYQ improved cardiac remodeling by counteracting those events. The administration of QSYQ was accompanied by a restoration of heart function and of the levels of Ang II, CGRP, TXB2, ET BNP, and cTnT. In addition, QSYQ attenuated administration, reduced the apoptosis, and decreased the level of TNF-α and active caspase-3. In conclusion, administration of QSYQ could attenuate Ameroid constrictor induced myocardial ischemia, and TNF-α and active caspase-3 seemed to be the critical potential target of QSYQ