11 research outputs found
Data_Sheet_1_Improve the diagnosis of idiopathic normal pressure hydrocephalus by combining abnormal cortical thickness and ventricular morphometry.docx
BackgroundThe primary imaging markers for idiopathic Normal Pressure Hydrocephalus (iNPH) emphasize morphological measurements within the ventricular system, with no attention given to alterations in brain parenchyma. This study aimed to investigate the potential effectiveness of combining ventricular morphometry and cortical structural measurements as diagnostic biomarkers for iNPH.MethodsA total of 57 iNPH patients and 55 age-matched healthy controls (HC) were recruited in this study. Firstly, manual measurements of ventricular morphology, including Evans Index (EI), z-Evans Index (z-EI), Cella Media Width (CMW), Callosal Angle (CA), and Callosal Height (CH), were conducted based on MRI scans. Cortical thickness measurements were obtained, and statistical analyses were performed using surface-based morphometric analysis. Secondly, three distinct models were developed using machine learning algorithms, each based on a different input feature: a ventricular morphology model (LVM), a cortical thickness model (CT), and a fusion model (All) incorporating both features. Model performances were assessed using 10-fold cross validation and tested on an independent dataset. Model interpretation utilized Shapley Additive Interpretation (SHAP), providing a visualization of the contribution of each variable in the predictive model. Finally, Spearman correlation coefficients were calculated to evaluate the relationship between imaging biomarkers and clinical symptoms.ResultsiNPH patients exhibited notable differences in cortical thickness compared to HC. This included reduced thickness in the frontal, temporal, and cingulate cortices, along with increased thickness in the supracentral gyrus. The diagnostic performance of the fusion model (All) for iNPH surpassed that of the single-feature models, achieving an average accuracy of 90.43%, sensitivity of 90.00%, specificity of 90.91%, and Matthews correlation coefficient (MCC) of 81.03%. This improvement in accuracy (6.09%), sensitivity (11.67%), and MCC (11.25%) compared to the LVM strategy was significant. Shap analysis revealed the crucial role of cortical thickness in the right isthmus cingulate cortex, emerging as the most influential factor in distinguishing iNPH from HC. Additionally, significant correlations were observed between the typical triad symptoms of iNPH patients and cortical structural alterations.ConclusionThis study emphasizes the significant role of cortical structure changes in the diagnosis of iNPH, providing a novel insights for assisting clinicians in improving the identification and detection of iNPH.</p
Additional file 3: of Identification of ANKDD1B variants in an ankylosing spondylitis pedigree and a sporadic patient
Table S3. NGS summary. (PPTX 54 kb
Additional file 7: of Identification of ANKDD1B variants in an ankylosing spondylitis pedigree and a sporadic patient
Figure S1. ANKDD1B protein domains and sequence alignment. Upper panel: human ANKDD1B domain structure. AR: ankyrin repeat. Lower panel: ANKDD1B protein sequence alignment from zebrafish to human. The two variants identified in the AS9 pedigree and the sAS_P1 patient are indicated. (TIFF 6077 kb
Additional file 5: of Identification of ANKDD1B variants in an ankylosing spondylitis pedigree and a sporadic patient
Table S5. ANKDD1B PCR and sequencing primers. (PPTX 40 kb
Additional file 1: of Identification of ANKDD1B variants in an ankylosing spondylitis pedigree and a sporadic patient
Table S1. List of patients from the AS9 pedigree and sAS_P1. (PPTX 45 kb
Additional file 2: of Identification of ANKDD1B variants in an ankylosing spondylitis pedigree and a sporadic patient
Table S2. Exome sequencing quality metrics. (PPTX 46 kb
Additional file 4: of Identification of ANKDD1B variants in an ankylosing spondylitis pedigree and a sporadic patient
Table S4. List of candidate genes. (PPTX 46 kb
Crystal Growth, Structural, Electrical, and Magnetic Properties of Mixed-Valent Compounds YbOs<sub>2</sub>Al<sub>10</sub> and LuOs<sub>2</sub>Al<sub>10</sub>
Single
crystals of YbOs<sub>2</sub>Al<sub>10</sub> and LuOs<sub>2</sub>Al<sub>10</sub> were grown for the first time using an aluminum self-flux
method. The compounds crystallized into a cagelike structure in space
group <i>Cmcm</i>, similar to the prototype compound YbFe<sub>2</sub>Al<sub>10</sub>. YbOs<sub>2</sub>Al<sub>10</sub> exhibited
a mixed-valent nature, as determined by magnetic susceptibility measurements
over a wide temperature range from 2 to 900 K, in which the inter–configuration–fluctuation
model revealed a broad peak around 400 K. In contrast, LuOs<sub>2</sub>Al<sub>10</sub> displayed Pauli-like paramagnetic behavior over the
same temperature range. Both compounds were metallic in nature between
2 and 300 K. The electronic specific heat coefficient of 21.3(2) mJ
mol<sup>–1</sup> K<sup>–2</sup> for YbOs<sub>2</sub>Al<sub>10</sub> was determined to be larger than that for LuOs<sub>2</sub>Al<sub>10</sub> [8.9(1) mJ mol<sup>–1</sup> K<sup>–2</sup>], reflecting the mixed-valent nature of the former. First-principles
calculations predicted the presence of a mixed-valent state in YbOs<sub>2</sub>Al<sub>10</sub>, in agreement with the experimental observations.
The novel compound YbOs<sub>2</sub>Al<sub>10</sub> elucidates the
evolution of the mixed-valent nature of the Yb-based ternary transition
metal aluminides from the 3d to 5d elements
Emissions of Parent, Nitro, and Oxygenated Polycyclic Aromatic Hydrocarbons from Residential Wood Combustion in Rural China
Residential wood combustion is one of the important sources
of
air pollution in developing countries. Among the pollutants emitted,
parent polycyclic aromatic hydrocarbons (pPAHs) and their derivatives,
including nitrated and oxygenated PAHs (nPAHs and oPAHs), are of concern
because of their mutagenic and carcinogenic effects. In order to evaluate
their impacts on regional air quality and human health, emission inventories,
based on realistic emission factors (EFs), are needed. In this study,
the EFs of 28 pPAHs (EF<sub>PAH28</sub>), 9 nPAHs (EF<sub>PAHn9</sub>), and 4 oPAHs (EF<sub>PAHo4</sub>) were measured for residential
combustion of 27 wood fuels in rural China. The measured EF<sub>PAH28</sub>, EF<sub>PAHn9</sub>, and EF<sub>PAHo4</sub> for brushwood were 86.7
± 67.6, 3.22 ± 1.95 × 10<sup>–2</sup>, and 5.56
± 4.32 mg/kg, which were significantly higher than 12.7 ±
7.0, 8.27 ± 5.51 × 10<sup>–3</sup>, and 1.19 ±
1.87 mg/kg for fuel wood combustion (<i>p</i> < 0.05).
Sixteen U.S. EPA priority pPAHs contributed approximately 95% of the
total of the 28 pPAHs measured. EFs of pPAHs, nPAHs, and oPAHs were
positively correlated with one another. Measured EFs varied obviously
depending on fuel properties and combustion conditions. The EFs of
pPAHs, nPAHs, and oPAHs were significantly correlated with modified
combustion efficiency and fuel moisture. Nitro-naphthalene and 9-fluorenone
were the most abundant nPAHs and oPAHs identified. Both nPAHs and
oPAHs showed relatively high tendencies to be present in the particulate
phase than pPAHs due to their lower vapor pressures. The gas-particle
partitioning of freshly emitted pPAHs, nPAHs, and oPAHs was primarily
controlled by organic carbon absorption
Synthesis, Structure, and Properties of the Layered Oxyselenide Ba<sub>2</sub>CuO<sub>2</sub>Cu<sub>2</sub>Se<sub>2</sub>
A new
layered oxyselenide, Ba<sub>2</sub>CuO<sub>2</sub>Cu<sub>2</sub>Se<sub>2</sub>, was synthesized under high-pressure and high-temperature
conditions and was characterized via structural, magnetic, and transport
measurements. It crystallizes into space group <i>I</i>4/<i>mmm</i> and consists of a square lattice of [CuO<sub>2</sub>] planes and antifluorite-type [Cu<sub>2</sub>Se<sub>2</sub>] layers,
which are alternately stacked along the <i>c</i> axis. The
lattice parameters are obtained as <i>a</i> = <i>b</i> = 4.0885 Å and <i>c</i> = 19.6887 Å. The Cu–O
bond length is given by half of the lattice constant <i>a</i>, i.e., 2.0443 Å. Ba<sub>2</sub>CuO<sub>2</sub>Cu<sub>2</sub>Se<sub>2</sub> is a semiconductor with a resistivity of ∼18
mΩ·cm at room temperature. No magnetic transition was found
in the measured temperature range, and the Curie–Weiss temperature
was obtained as −0.2 K, suggesting a very weak exchange interaction.
The DFT+<i>U</i><sub>eff</sub> calculation demonstrates
that the band gap is about 0.2 eV for the supposed antiferromagnetic
order, and the density of state near the top of the valence band is
mainly contributed from the Se 4p electrons