Particle velocity measurement of binary mixtures in the riser of a circulating fluidized bed by the combined use of electrostatic sensing and high-speed imaging

Zhang WB acknowledges the financial supports from the National Natural Science Foundation of China (No. 61403138) and Beijing Natural Science Foundation (No. 3202028). Zhan W and Wang CH acknowledge the research programme funded by the National Research Foundation (NRF), Prime Minister’s Office, Singapore under its Campus for Research Excellence and Technological Enterprise (CREATE) programme. Grant Number R-706-001-102–281, National University of Singapore.Peer reviewedPublisher PD

The bHLH Transcription Factor, Hairy, Refines the Terminal Cell Fate in the Drosophila Embryonic Trachea

Background: The pair-rule gene, hairy, encodes a basic helix-loop-helix transcription factor and is required for patterning of the early Drosophila embryo and for morphogenesis of the embryonic salivary gland. Although hairy was shown to be expressed in the tracheal primordia and in surrounding mesoderm, whether hairy plays a role in tracheal development is not known. Principal Findings: Here, we report that hairy is required for refining the terminal cell fate in the embryonic trachea and that hairy’s tracheal function is distinct from its earlier role in embryonic patterning. In hairy mutant embryos where the repressive activity of hairy is lost due to lack of its co-repressor binding site, extra terminal cells are specified in the dorsal branches. We show that hairy functions in the muscle to refine the terminal cell fate to a single cell at the tip of the dorsal branch by limiting the expression domain of branchless (bnl), encoding the FGF ligand, in surrounding muscle cells. Abnormal activation of the Bnl signaling pathway in hairy mutant tracheal cells is exemplified by increased number of dorsal branch cells expressing Bnl receptor, Breathless (Btl) and Pointed, a downstream target of the Bnl/Btl signaling pathway. We also show that hairy genetically interacts with bnl in TC fate restriction and that overexpression of bnl in a subset of the muscle surrounding tracheal cells phenocopied the hairy mutant phenotype. Conclusions/Significance: Our studies demonstrate a novel role for Hairy in restriction of the terminal cell fate by limitin

A Comparative Study of Survival, Metabolism, Immune Indicators, and Proteomics, in Five Batches of Japanese Scallop Mizuhopecten yessoensis under Short-Term High Temperature Stress

Five batches of the Japanese scallop Mizuhopecten pyessoensis were tested for survival rate, oxygen consumption, catalase (CAT) and superoxide dismutase (SOD) activities, total antioxidant capacities (T-AOC) contents, and proteomics under short-term high temperature conditions. The five batches, (W1, W2, W3, W4, W5) selected from the established 21 ‘ivory white’ M. yessoensis batches, had higher survival rates than the other batches after one year of culture. Initial rearing water temperature of 15°C was increased by 1°C per day with a cooling and heating system. The temperature was raised until over 50% of the scallops from 3 batches died. This occurred at 30°C. The higher than normal culture temperature conditions showed significant or highly significant differences in the responses of some of the batches. Some showed significantly higher survival rates and significantly different rates of oxygen consumption. CAT activity, SOD activity and T-AOC content was similar in the five batches, and all three indices were significantly lower in W3 and W5 than in the other batches (P<0.01). Expression patterns of MDA content were opposite to those of CAT activity, SOD activity and T-AOC content. Protein profiles of all five batches were similar; the sizes of the predominant bands ranged from 20-110 kDa. We identified twenty-eight proteins with high scores in the database. These included heat shock proteins (HSPs), glucose-regulated protein 94, and arginine kinase

The Impact of Chronic Heat Stress on the Growth, Survival, Feeding, and Differential Gene Expression in the Sea Urchin Strongylocentrotus intermedius

To explore the impact of chronic heat stress on commercial echinoderms, the present study assessed the effects of chronic high temperature on the growth, survival, feeding, and differential gene expression in the sea urchin Strongylocentrotus intermedius cultured in northern Yellow Sea in China. One suitable seawater condition (20°C) and one laboratory-controlled high temperature condition (25°C) were set up. After 28 days incubation, our results showed that: (1) The specific growth, survival, and ingestion rates of S. intermedius reared under high temperature (25°C) decreased compared to those reared under optimal temperature (20°C) conditions; (2) comparative transcriptome analysis identified 2,125 differentially expressed genes (DEGs) in S. intermedius reared under high temperature (25°C) compared to those subjected to optimal temperature condition (20°C), which included 1,015 upregulated and 1,100 downregulated genes. The accuracy of the transcriptome profiles was verified by quantitative real-time PCR (qRT-PCR). Further Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways analyses revealed that these DEGs mainly enriched the functional categories of ribosome, protein processing in endoplasmic reticulum, and prion diseases. A total of 732 temperature-induced expressed genes, such as ATP5, heat shock protein 70, and heat shock protein 90, were identified as candidates that were closely correlated with heat resistance in S. intermedius. Differentially expressed transcription factors (TFs), such as AP-1, Fos, CREB, and ZNF, were also identified as potential regulators that regulate the molecular network that was associated with responses to heat stress in sea urchins. Observations in the present study provide additional information that improves our understanding of the molecular mechanism of temperate echinoid species in response to heat stress, as well as theoretical basis for the molecular-assisted breeding of heat-resistant sea urchins

Integrated microRNA-mRNA analysis provides new insights into gonad coloration in the sea urchin Strongylocentrotus intermedius

Comparative microRNA (miRNA) and mRNA transcriptome analyses were performed on Strongylocentrotus intermedius of the same sex with significant gonadal color differences. The results indicated that 1) the color of female gonads was generally superior to that of males. 2) Comparative and integrated miRNA and mRNA transcriptome analyses identified differentially expressed genes (DEGs) and differentially expressed miRNAs (DEMs) in female and male individuals with significant gonadal color differences. Common and sex-specific DEGs and “DEM-DEG” pairs involved in carotenoid absorption, accumulation, and transformation were identified as candidates correlated with gonad coloration in S. intermedius. Collectively, the results from this study have enriched our knowledge of the process of sea urchin gonad coloration and should provide additional clues for increasing the gonad quality of commercial sea urchins from molecular and metabolic aspects

The potential mechanism of Aidi injection against neuroblastoma—an investigation based on network pharmacology analysis

Background: Aidi injection, a classic traditional Chinese medicine (TCM) formula, has been used on a broader scale in treating a variety of cancers. In this study, we aimed to explore the potential anti-tumor effects of Aidi injection in the treatment of neuroblastoma (NB) using network pharmacology (NP).Methods: To elucidate the anti-NB mechanism of Aidi injection, an NP-based approach and molecular docking validation were employed. The compounds and target genes were collected from the Traditional Chinese Medicine Systems Pharmacology (TCMSP) database and Bioinformatics Analysis Tool for Molecular mechANism of Traditional Chinese Medicine (BATMAN-TCM) database. The protein–protein interaction network was constructed using the STRING database. clusterProfiler (R package) was utilized to annotate the bioinformatics of hub target genes. The gene survival analysis was performed on R2, a web-based genomic analysis application. iGEMDOCK was used for molecular docking validation, and GROMACS was utilized to validate molecular docking results. Furthermore, we investigated the anticancer effects of gomisin B and ginsenoside Rh2 on human NB cells using a cell viability assay. The Western blot assay was used to validate the protein levels of target genes in gomisin B- and ginsenoside Rh2-treated NB cells.Results: A total of 2 critical compounds with 16 hub target genes were identified for treating NB. All 16 hub genes could potentially influence the survival of NB patients. The top three genes (EGFR, ESR1, and MAPK1) were considered the central hub genes from the drug–compound–hub target gene–pathway network. The endocrine resistance and estrogen signaling pathways were identified as the therapeutic pathways using the Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. Gomisin B and ginsenoside Rh2 showed a good binding ability to the target protein in molecular docking. The results of cell experiments showed the anti-NB effect of gomisin B and ginsenoside Rh2. In addition, the administration of gomisin B over-regulated the expression of ESR1 protein in MYCN-amplified NB cells.Conclusion: In the present study, we investigated the potential pharmacological mechanisms of Aidi against NB and revealed the anti-NB effect of gomisin B, providing clinical evidence of Aidi in treating NB and establishing baselines for further research

Cellular anatomy of the mouse primary motor cortex.

An essential step toward understanding brain function is to establish a structural framework with cellular resolution on which multi-scale datasets spanning molecules, cells, circuits and systems can be integrated and interpreted1. Here, as part of the collaborative Brain Initiative Cell Census Network (BICCN), we derive a comprehensive cell type-based anatomical description of one exemplar brain structure, the mouse primary motor cortex, upper limb area (MOp-ul). Using genetic and viral labelling, barcoded anatomy resolved by sequencing, single-neuron reconstruction, whole-brain imaging and cloud-based neuroinformatics tools, we delineated the MOp-ul in 3D and refined its sublaminar organization. We defined around two dozen projection neuron types in the MOp-ul and derived an input-output wiring diagram, which will facilitate future analyses of motor control circuitry across molecular, cellular and system levels. This work provides a roadmap towards a comprehensive cellular-resolution description of mammalian brain architecture

Biochemical Components of Different Colored Strains of Cultured Japanese Scallop (Mizuhopecten yessoensis) Under Different Cultivation Systems

In this study, the water and total fat content, total crude protein, ash, fatty acids, amino acids and mineral elements of scallop adductor muscle were used to understand the biochemical components of different colored strain of Japanese scallop, Mizuhopecten yessoensis, cultured using different cultivation methods. Common scallops had slightly higher moisture, and total protein content, significantly higher total fat content, and significantly lower ash content than ivory white scallops when cultivated under both suspended and bottom culture conditions. For scallops of both colors, suspended culture individuals had slightly higher moisture, total protein content, significantly lower total fat and ash content, compared to bottom culture conditions. Most amino acids were more abundant in scallops from the bottom culture group than in scallops from the suspended culture group. The ivory white scallops contained slightly higher amounts of total amino acids, essential amino acids, and flavor-imparting amino acids, than the common scallops under a given culture method. In the suspended culture group, common scallops had higher content of unsaturated fatty acids, mono-unsaturated fatty acids, polyunsaturated fatty acids, lower contents of eicosapentaenoic acid and docosahexaenoic acid, compared with ivory white scallops. In the bottom culture group, common scallops contained more unsaturated fatty acids, polyunsaturated fatty acids, eicosapentaenoic acid and docosahexaenoic acid compared with ivory white scallops. In common scallops, levels of mineral elements (apart from Fe and Mg) were higher in suspended culture than in bottom culture. Levels of mineral elements in ivory white scallops in suspended culture were higher than or the same as those in bottom culture with the exception of K and Mn. In conclusion, different cultivation methods and shell color of M. yessoensis affected biochemical composition, amino acid content, fatty acid content, and mineral element content of the scallops. The research results may provide useful information for selective breeding, culture methods, deep processing, and comprehensive utilization of M. yessoensis

A Carrier Synchronization Lock Detector Based on Weighted Detection Statistics for APSK Signals

To solve the application limitations of conventional detectors caused by discrete phase distribution of high-order APSK signals, and the problem that the detection performance will degrade when the automatic control gain is unideal, a carrier synchronization lock detector based on weighted detection statistics is proposed for APSK signals. Based on the detection statistics of the Linn detector, the proposed detector calculates a weighted factor according to the amplitude difference of the signal on the APSK constellation to adjust the weight of detection statistics for different rings. The proposed detector solves the detection performance degradation problem of the Linn detector caused by uneven phase distribution. In order to further improve detection performance, the detection threshold and statistical signal length are reasonably designed. The expectation and variance properties are derived, and the lock detection probability is analyzed. The performance of the proposed detector is verified through simulations. Simulation results show that the proposed carrier synchronization lock detector has better performance than the Linn detector

Characterization of a novel glutamate dehydrogenase gene and its response to heat stress in the sea urchin Strongylocentrotus intermedius

Glutamate dehydrogenase (GDH), a key metabolic enzyme that is ubiquitous across almost all living species, is essential for cell survival. To elucidate the characteristics and functions of the GDH gene in the sea urchin, we cloned and characterized the full-length cDNA of a novel GDH homolog from Strongylocentrotus intermedius, herein designated SiGDH. The full-length SiGDH gene was 2499 bp, with an open reading frame (ORF) of 1635 bp, encoding 544 amino acids. Bioinformatic analyses revealed that the predicted SiGDH protein contained the conserved ELFV_dehydrog_N and ELFV_dehydrog domains and that this protein had the highest sequence identity with the GDH protein from Strongylocentrotus purpuratus. Tissue-specific differences in SiGDH relative expression patterns and enzyme activity levels were observed, and the highest relative expression and total enzyme activity of SiGDH were determined to be in the gonad. Changes in SiGDH relative expression and enzyme activity in the gonad were observed after both gradual and acute heat stress. Together, our observations help to clarify the characteristics of this GDH homolog, as well as its associations with heat resistance in echinoderms