22 research outputs found

    Screen shots showing DNA methylation query by Gene symbol GSTP1 in human.

    No full text
    <p>A, the search form page in which the exclusion relationship between Refseq ID, Gene symbol, and Location is indicated. B, the query result page embedded with the link to track view in UCSC genome browser. C, the details page showing supportive references and DNA methylation loci in a graph.</p

    Number of epigenetic records and genes in PEpiD, with gene numbers in parentheses.

    No full text
    <p>Number of epigenetic records and genes in PEpiD, with gene numbers in parentheses.</p

    Map of Henan Province, showing laboratory-confirmed FTLS cases in 2011–2012.

    No full text
    <p>1 Shangcheng, 2 Guangshan, 3 Sihe), 4 Pingqiao, 5 Xinxian, 6 Luoshan, 7 Gushi, 8 Huangchuan, 9 Tongbai, 10 Xixian, 11 Queshan, 12 Luyi, 13 Zhengyang, 14 Dengfeng.</p

    Histone modification levels are predictive for expression of genes categorized by CpG level in promoter.

    No full text
    <p>(A) Composition of all promoters classified by histone modification occupancy. “Active” promoters contain occupancy of the active histone marks (H3K4me3 or H3K9ac) higher than the average level of all promoters but occupancy of the repressive histone mark (H3K27me3) lower than the average level. “Repressive” promoters contain occupancy of H3K27me3 higher than the average level and are exclusive of the “active” promoters. “Bivalent” promoters contain occupancy of H3K4me3 or H3K9ac higher than the average level and occupancy of H3K27me3 higher than the average level. “None” promoters are the rest. (B) Box plots show expression levels of genes in each category in (A). (** <i>p</i>-value ≤ 0.01, * <i>p</i>-value ≤ 0.05, n.s. <i>p</i>-value > 0.05, Student’s <i>t</i> test.) (C) H3K36me3 profiles in different sets of genes classified in (A). HCP: CpG-rich promoters, ICP: intermediate-CpG-level promoters, LCP CpG-poor promoters.</p

    Correlation of histone modification profiles at all promoters and gene expression.

    No full text
    <p>The scatter plots show the correlation in LLC-NR sample (A) and LLC-R sample (B), respectively. The Spearman correlation coefficients are shown.</p

    Phylogenetic analysis of FTLSV strains isolated from Henan Province during 2011 and 2012, compared with other bunyaviruses.

    No full text
    <p>The phylogenetic tree was constructed by using the maximum likelihood method with the MEGA5 software. The reliability values indicated at the branch nodes were determined using 1,000 bootstrap replications. Isolated FTLSV strains in 2011 and 2012 from Henan Province were labeled by black solid triangles. Phylogenetic relationship of FTLSV with other bunyaviruses, based on the complete L, M, S segment sequences, are shown in panel A, B, C, respectively.</p
    corecore