710 research outputs found

    Wild Soybeans: An Opportunistic Resource for Soybean Improvement

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    Reduced genetic diversity in cultivated soybean coupled with changing dietary expectations, climate change, and increase in population demands expansion of current gene pool. Wild soybeans are an opportunistic resource and a rational choice to discover novel genes and gene families for alternative crop production systems and to improve soybean. Multiple agronomic traits, lineage-specific genes, and domestication-related traits have been studied in wild soybeans in contrast to cultivated soybeans, and it has been proved that wild soybeans are an essential genomic resource containing unique and useful genetic resources that have been lost during domestication to expand the gene pool in order to improve soybean. Wild soybean is very often a plant of disturbed habitats of Southeast Asia. The vulnerability of these habitats to agriculture systems and urban expansion causes a reduction in the area of distribution and hence the diversity. To capture the wild soybean genetic diversity in its main distribution areas, a unique and comprehensive germplasm collection, characterization, and conservation platform is direly needed. Chung’s Wild Legume Germplasm Collection is preserving and maintaining a representative wild soybean germplasm collection guided by the principles of conservation genetics. These wild legumes and particularly wild soybean is a promising genetic resource for soybean breeders

    Upper torso and pelvis linear velocity during the downswing of elite golfers

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    BACKGROUND: During a golf swing, analysis of the movement in upper torso and pelvis is a key step to determine a motion control strategy for accurate and consistent shots. However, a majority of previous studies that have evaluated this movement limited their analysis only to the rotational movement of segments, and translational motions were not examined. Therefore, in this study, correlations between translational motions in the 3 axes, which occur between the upper torso and pelvis, were also examined. METHODS: The experiments were carried out with 14 male pro-golfers (age: 29 ± 8 years, career: 8.2 ± 4.8years) who registered in the Korea Professional Golf Association (KPGA). Six infrared cameras (VICON; Oxford Metrics, Oxford, UK) and SB-Clinc software (SWINGBANK Ltd, Korea) were used to collect optical marker trajectories. The center of mass (CoM) of each segment was calculated based on kinematic principal. In addition, peak value of CoM velocity and the time that each peak occurred in each segment during downswing was calculated. Also, using cross-correlation analysis, the degree of coupling and time lags of peak values occurred between and within segments (pelvis and upper torso) were investigated. RESULTS: As a result, a high coupling strength between upper torso and pelvis with an average correlation coefficient = 0.86 was observed, and the coupling between segments was higher than that within segments (correlation coefficient = 0.81 and 0.77, respectively). CONCLUSIONS: Such a high coupling at the upper torso and pelvis can be used to reduce the degree of motion control in the central nervous system and maintain consistent patterns in the movement. The result of this study provides important information for the development of optimal golf swing movement control strategies in the future

    Genetic diversity, population structure and marker- trait association for 100-seed weight in international safflower panel using silicodart marker information

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    Safflower is an important oilseed crop mainly grown in the arid and semi-arid regions of the world. The aim of this study was to explore phenotypic and genetic diversity, population structure, and marker-trait association for 100-seed weight in 94 safflower accessions originating from 26 countries using silicoDArT markers. Analysis of variance revealed statistically significant genotypic effects (p < 0.01), while Turkey samples resulted in higher 100-seed weight compared to Pakistan samples. A Constellation plot divided the studied germplasm into two populations on the basis of their 100-seed weight. Various mean genetic diversity parameters including observed number of alleles (1.99), effective number of alleles (1.54), Shannon’s information index (0.48), expected heterozygosity (0.32), and unbiased expected heterozygosity (0.32) for the entire population exhibited sufficient genetic diversity using 12232 silicoDArT markers. Analysis of molecular variance (AMOVA) revealed that most of the variations (91%) in world safflower panel are due to differences within country groups. A model-based structure grouped the 94 safflower accessions into populations A, B, C and an admixture population upon membership coefficient

    A Study on the Flora of 15 Islands in the Western Sea of Jeollanamdo Province, Korea

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    AbstractThis study aims to investigate the flora of 15 islands in Yeonggwang, Shinan, and Mokpo of the Jeollanamdo province and the distribution of major plants in order to use the results as fundamental data for studies on plants in islands. Field surveys were performed 25 times from 2004 to 2010 to investigate the flora in these regions. A total of 793 taxa including 123 families, 421 genera, 695 species, 2 subspeices, 88 varieties, and 8 forms was found. Korean endemic plants including Hepatica insularis and Galium koreanum were 6 taxa. 25 taxa of rare plants including Trachomitum lancifolium, Daphne kiusiana, and Centranthera cochinchinensis var. lutea were confirmed 120 taxa floristic special plant species were confirmed; 11 taxa of the fifth class, four taxa of the fourth class, 28 taxa of the third class. 78 taxa of naturalized plants were confirmed

    Transmit Beamforming with Reduced Channel Information in OFDM Based Wireless Systems

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    In this paper, we consider transmit beamforming that works with reduced channel state information in OFDM based multiple-input single-output (MISO) wireless systems. The proposed scheme significantly reduces the amount of feedback signaling burden by generating beamforming weights using information on the previous beamforming weights and channel correlation. The feedback signaling overhead is further reduced with the use of clustering and interpolation techniques. Simulation results show that the proposed scheme outperforms conventional beamforming techniques, while using the same amount of feedback signaling overhead.Seoul R&BD Progra

    Antibiotic resistance mechanisms inform discovery: identification and characterization of a novel amycolatopsis strain producing ristocetin.

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    Discovering new antibiotics is a major scientific challenge, made increasingly urgent by the continued development of resistance in bacterial pathogens. A fundamental understanding of the mechanisms of bacterial antibiotic resistance will be vital for the future discovery or design of new, more effective antibiotics. We have exploited our intimate knowledge of the molecular mechanism of glycopeptide antibiotic resistance in the harmless bacterium Streptomyces coelicolor to develop a new two-step cell wall bioactivity screen, which efficiently identified a new actinomycete strain containing a previously uncharacterized glycopeptide biosynthetic gene cluster. The screen first identifies natural product extracts capable of triggering a generalized cell wall stress response and then specifically selects for glycopeptide antibacterials by assaying for the induction of glycopeptide resistance genes. In this study, we established a diverse natural product extract library from actinomycete strains isolated from locations with widely varying climates and ecologies, and we screened them using the novel two-step bioassay system. The bioassay ultimately identified a single strain harboring the previously unidentified biosynthetic gene cluster for the glycopeptide ristocetin, providing a proof of principle for the effectiveness of the screen. This is the first report of the ristocetin biosynthetic gene cluster, which is predicted to include some interesting and previously uncharacterized enzymes. By focusing on screening libraries of microbial extracts, this strategy provides the certainty that identified producer strains are competent for growth and biosynthesis of the detected glycopeptide under laboratory conditions.This work was supported by funding from the Royal Society, UK (516002.K5877/ROG), the Medical Research council, UK (G0700141) and St. John’s College, University of CambridgeThis the the author accepted manuscript. The final version is available from ASM at http://aac.asm.org/content/early/2014/07/09/AAC.03349-14.abstract

    Glutathione S-transferase pi (GST-pi) inhibition and anti-inflammation activity of the ethyl acetate extract of Streptomyces sp. strain MJM 8637

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    AbstractTo investigate the anti-cancer properties of soil-borne actinobacteria, MJM 8637, the glutathione S-transferase pi (GST-pi) assay, anti-tumor necrosis factor (TNF)-α assay, the level of antioxidant potential by DPPH radical scavenging activity, NO scavenging activity, and ABTS radical scavenging activity in ethyl acetate extract were determined. The 16S rDNA sequencing analysis revealed that Streptomyces sp. strain MJM 8637, which was isolated from Hambak Mountain, Korea, has 99.5% similarity to Streptomyces atratus strain NBRC 3897. The physiological and the morphological characteristics of the strain MJM 8637 were also identified. The ethyl acetate extract of MJM 8637 inhibited TNF-α production approximately 61.8% at concentration 100μg/ml. The IC50 value of the strain MJM 8637 extract on GST-pi was identified to be 120.2±1.6μg/ml. In DPPH, NO, and ABTS radical scavenging assays, the IC50 values of the strain MJM 8637 extract were found to be 977.2μg/ml, 1143.7μg/ml, and 454.4μg/ml, respectively. The ethyl acetate extract of the strain MJM 8637 showed 97.2±1.3% of cell viability at 100μg/ml in RAW 264.7 cell viability assay. The results obtained from this study suggest that the ethyl acetate extract of Streptomyces sp. strain MJM 8637 could be considered as a potential source of drug for the cancers that have multidrug resistance with its GST-pi inhibition and anti-inflammation activities, and low cytotoxicity

    Qualitative Anatomical Characteristics of Compression, Lateral, and Opposite Woods in Pinus merkusii and Agathis loranthifolia

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    This study aimed to observe andcompare the qualitative anatomical characteristics of compression (CW), lateral (LW), and opposite (OW) woodsin the stem wood of Sumatran pine (Pinus merkusii) and Agathis (Agathis loranthifolia). The anatomical characteristics were observed using optical microscopy and scanning electron microscopy. CW showed a gradual transition from earlywood to latewood in both species, circular tracheid shape, many intercellular spaces, irregular tracheid tips, helical cavities, and slit-like bordered pits. CW of Sumatran pine showed an indistinct growth ring, whileCW of Agathis showed a distinct growth ring. Helical ribs occurred only in CW of Sumatran pine. LW and OW showed an oval tracheid with an angular outline, regular tracheid arrangement, and tapered tracheid tips in both species. LW and OW showed mainly uniseriate bordered pits in Sumatran pine, while LW and OW of Agathis frequently showed multiseriatebordered pits. CW, LW, and OW showed fusiform and uniseriate rays in Sumatran pine, while those of Agathis showed uniseriate rays. In conclusion, CW showed distinctive qualitative anatomical characteristics to LW and OW in both species, while LW and OW mainly showed similar characteristics. In particular, there were considerably distinctive characteristics between CW from both species.Keywords: Agathis, anatomical characteristics, reaction wood, Sumatran pin
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