13 research outputs found
Strategies for Modulating the pH-Dependent Activity of a Family 11 Glycoside Hydrolase
The
pH-dependent activity of wild-type <i>Bacillus circulans</i> xylanase (BcX) is set by the p<i>K</i><sub>a</sub> values
of its nucleophile Glu78 and general acid/base Glu172. Herein, we
examined several strategies to manipulate these p<i>K</i><sub>a</sub> values and thereby shift the pH<sub>opt</sub> at which
BcX is optimally active. Altering the global charge of BcX through
random succinylation had no significant effect. Mutation of residues
near or within the active site of BcX, but not directly contacting
the catalytic carboxyls, either had little effect or reduced its pH<sub>opt</sub>, primarily by lowering the apparent p<i>K</i><sub>a</sub> value of Glu78. However, mutations causing the largest
p<i>K</i><sub>a</sub> changes also impaired activity. Although
not found as a general acid/base in naturally occurring xylanases,
substitution of Glu172 with a His lowered the pH<sub>opt</sub> of
BcX from 5.6 to 4.7 while retaining 8% activity toward a xylobioside
substrate. Mutation of Asn35, which contacts Glu172, to either His
or Glu also led to a reduction in pH<sub>opt</sub> by ∼1.2
units. Detailed p<i>K</i><sub>a</sub> measurements by NMR
spectroscopy revealed that, despite the opposite charges of the introduced
residues, both the N35H and N35E forms of BcX utilize a reverse protonation
mechanism. In this mechanism, the p<i>K</i><sub>a</sub> value
of the general acid is lower than that of the nucleophile, and only
a small population of enzyme is in a catalytically competent ionization
state. However, overall activity is maintained due to the increased
strength of the general acid. This study illustrates several routes
for altering the pH-dependent properties of xylanases, while also
providing valuable insights into complex protein electrostatics