Number of aligned sequences between two databases based different alignment length threshold.

<p>The upper is the aligned sequences number of clementine database, the downer is the aligned sequences number of orange database.</p

Workflow for identifying peptides based on integrated database.

<p>Workflow for identifying peptides based on integrated database.</p

Distribution (by number and percentage) of protein groups identified with homologous database and integrated database into relevant secondary level GO classes, based on GO annotation.

<p>Distribution (by number and percentage) of protein groups identified with homologous database and integrated database into relevant secondary level GO classes, based on GO annotation.</p

Identification comparison between homologous database and transcriptome based database (T. based database).

<p>(A) Venn chart for distribution of the proteins identified by MaxQuant based on two databases. (B) Numbers of proteins identification based on homologous and integrated database.</p