Current evidences on XPC polymorphisms and gastric cancer susceptibility: a meta-analysis

BACKGROUND: Reduced DNA repair capacities due to inherited polymorphisms may increase the susceptibility to cancers including gastric cancer. Previous studies investigating the association between Xeroderma Pigmentosum group C (XPC) gene polymorphisms and gastric cancer risk reported inconsistent results. We performed a meta-analysis to summarize the possible association. METHODS: All studies published up to January 2014 on the association between XPC polymorphisms and gastric cancer risk were identified by searching electronic databases PubMed, EMBASE, Cochrane library, and Chinese Biomedical Literature database (CBM). The association between XPC polymorphisms and gastric cancer risk was assessed by odds ratios (ORs) together with their 95% confidence intervals (CIs). RESULTS: Six studies with 1,355 gastric cancer cases and 2,573 controls were finally included in the meta-analysis. With respect to Lys939Gln polymorphism, we did not observe a significant association when all studies were pooled into the meta-analysis. When stratified by ethnicity, source of control, and study quality, statistical significant association was not detected in all subgroups. With respect to Ala499Val and PAT−/+polymorphisms, we also did not observe any significant association with gastric cancer risk in the pooled analysis. CONCLUSIONS: This meta-analysis based on current evidences suggested that the XPC polymorphisms (Lys939Gln, Val499Arg, and PAT−/+) did not contribute to gastric cancer risk. Considering the limited sample size and ethnicity included in the meta-analysis, further larger scaled and well-designed studies are needed to confirm our results. VIRTUAL SLIDES: The virtual slide(s) for this article can be found here: http://www.diagnosticpathology.diagnomx.eu/vs/148588031255506

Hybrid Metal Graphene-Based Tunable Plasmon-Induced Transparency in Terahertz Metasurface

In this paper, we look at the work of a classical plasmon-induced transparency (PIT) based on metasurface, including a periodic lattice with a cut wire (CW) and a pair of symmetry split ring resonators (SSR). Destructive interference of the ‘bright-dark’ mode originated from the CW and a pair of SSRs and resulted in a pronounced transparency peak at 1.148 THz, with 85% spectral contrast ratio. In the simulation, the effects of the relative distance between the CW and the SSR pair resonator, as well as the vertical distance of the split gap, on the coupling strength of the PIT effect, have been investigated. Furthermore, we introduce a continuous graphene strip monolayer into the metamaterial and by manipulating the Fermi level of the graphene we see a complete modulation of the amplitude and line shape of the PIT transparency peak. The near-field couplings in the relative mode resonators are quantitatively understood by coupled harmonic oscillator model, which indicates that the modulation of the PIT effect result from the variation of the damping rate in the dark mode. The transmitted electric field distributions with polarization vector clearly confirmed this conclusion. Finally, a group delay t g of 5.4 ps within the transparency window is achieved. We believe that this design has practical applications in terahertz (THz) functional devices and slow light devices

http://purl.access.gpo.gov/GPO/LPS108982 (accessed

XPC Lys939Gln polymorphism contributes to colorectal cancer susceptibility: evidence from a meta-analysi

RESEARCH Open Access Current evidences on XPC polymorphisms and gastric cancer susceptibility: a meta-analysis

Background: Reduced DNA repair capacities due to inherited polymorphisms may increase the susceptibility to cancers including gastric cancer. Previous studies investigating the association between Xeroderma Pigmentosum group C (XPC) gene polymorphisms and gastric cancer risk reported inconsistent results. We performed a meta-analysis to summarize the possible association. Methods: All studies published up to January 2014 on the association between XPC polymorphisms and gastric cancer risk were identified by searching electronic databases PubMed, EMBASE, Cochrane library, and Chinese Biomedical Literature database (CBM). The association between XPC polymorphisms and gastric cancer risk was assessed by odds ratios (ORs) together with their 95 % confidence intervals (CIs). Results: Six studies with 1,355 gastric cancer cases and 2,573 controls were finally included in the meta-analysis. With respect to Lys939Gln polymorphism, we did not observe a significant association when all studies were pooled into the meta-analysis. When stratified by ethnicity, source of control, and study quality, statistical significant association was not detected in all subgroups. With respect to Ala499Val and PAT−/+polymorphisms, we also did not observe any significant association with gastric cancer risk in the pooled analysis. Conclusions: This meta-analysis based on current evidences suggested that the XPC polymorphisms (Lys939Gln, Val499Arg, and PAT−/+) did not contribute to gastric cancer risk. Considering the limited sample size and ethnicity included in the meta-analysis, further larger scaled and well-designed studies are needed to confirm our results

Association of single nucleotide polymorphisms in VDR and DBP genes with HBV-related hepatocellular carcinoma risk in a Chinese population.

Polymorphisms of genes encoding components of the vitamin D pathway including vitamin D receptor (VDR) and vitamin D binding protein (DBP) have been widely investigated because of the complex role played by vitamin D in cancer tumorogenesis. In this study, we investigated the association between VDR and DBP gene polymorphisms and HBV-related HCC risk in a Chinese population.Study subjects were divided into three groups: 184 HBV patients with HCC, 296 HBV patients without HCC, and 180 healthy controls. The VDR rs2228570, and rs3782905 and the DBP rs7041 polymorphisms were genotyped using PCR-RFLP and the VDR rs11568820 polymorphism was genotyped by PCR-SSP, respectively. DNA sequencing was performed to validate the genotype results.We found that there were significant differences in the genotype and allele frequencies of the VDR rs2228570 and DBP rs7041 polymorphisms between HBV patients with HCC and healthy controls. The rs2228570 T allele was associated with a significant increased HBV-related HCC risk as compared with the C allele. The rs2228570 TT and TT/TC genotypes were correlated with a significant increased HBV-related HCC risk when compared with the wild-type CC homozygote. Similarly, the rs7041 G allele was associated with a significant increased HBV-related HCC risk as compared with the T allele. The rs7041 GG and GG/TG genotypes were correlated with a significant increased HBV-related HCC risk when compared with the wild-type TT homozygote. However, we did not observe any significant effect of VDR rs11568820, and rs3782905 polymorphisms on HBV-related HCC risk in this population. In haplotype analysis, we also did not find any significant differences in haplotype frequencies of the VDR gene between HBV patients with HCC and the healthy controls.We conclude that the VDR rs2228570 and DBP rs7041 polymorphisms may contribute to increased susceptibility to HBV-related HCC in the Chinese population. Due to the marginal significance, further large and well-designed studies in diverse ethnic populations are needed to confirm our results

Dynamically Tunable Resonant Strength in Electromagnetically Induced Transparency (EIT) Analogue by Hybrid Metal-Graphene Metamaterials

In this paper, a novel method to realize a dynamically tunable analogue of EIT for the resonance strength rather than the resonance frequency is proposed in the terahertz spectrum. The introduced method is composed of a metal EIT-like structure, in which a distinct EIT phenomenon resulting from the near field coupling between bright and dark mode resonators can be obtained, as well as an integrated monolayer graphene ribbon under the dark mode resonator that can continuously adjust the resonance strength of transparency peak by changing the Fermi level of the graphene. Comparing structures that need to be modulated individually for each unit cell of the metamaterials, the proposed modulation mechanism was convenient for achieving synchronous operations for all unit cells. This work demonstrates a new platform of modulating the EIT analogue and paves the way to design terahertz functional devices which meet the needs of optical networks and terahertz communications

CASP8 -652 6N del polymorphism contributes to colorectal cancer susceptibility: evidence from a meta-analysis.

OBJECTIVE: Caspase-8 (CASP8) plays a central role in the apoptotic pathway and aberrant regulation of this pathway may cause cancers. Previous studies investigating the association between CASP8 -652 6N ins/del polymorphism and colorectal cancer (CRC) risk showed inconclusive results. We performed a meta-analysis of all available studies to investigate this association. METHODS: All studies published up to October 2013 on the association between CASP8 -652 6N ins/del polymorphism and CRC risk were identified by searching electronic databases PubMed, EMBASE, and Cochrane library. The association between CASP8 -652 6N ins/del polymorphism and CRC risk was assessed by odds ratios (ORs) together with their 95% confidence intervals (CIs). RESULTS: Six studies with 6,325 cases and 6,842 controls were included in the meta-analysis. We observed that the CASP8 -652 6N ins/del polymorphism was significantly correlated with CRC risk when all studies were pooled into the meta-analysis (ins/del vs. ins/ins: OR = 0.890, 95%CI 0.821-0.964, P = 0.004; del/del + ins/del vs. ins/ins: OR = 0.899, 95%CI 0.833-0.970, P = 0.006). In stratified analyses by ethnicity, source of control, and quality score, significant association was observed in Asians (ins/del vs. ins/ins: OR = 0.862, 95%CI 0.761-0.977, P = 0.020; del/del + ins/del vs. ins/ins: OR = 0.845, 95%CI 0.749-0.953, P = 0.006), population-based studies (ins/del vs. ins/ins: OR = 0.890, 95%CI 0.813-0.975, P = 0.012; del/del + ins/del vs. ins/ins: OR = 0.901, 95%CI 0.827-0.982, P = 0.018), and high quality studies. However, in subgroup analysis according to cancer location, no significant association was detected. CONCLUSIONS: The present meta-analysis suggests that the CASP8 is a candidate gene for CRC susceptibility. The CASP8 -652 6N ins/del polymorphism may play a protective role in CRC development especially among Asians. Further large and well-designed studies are needed to confirm this association

Polymerase chain reaction–restriction fragment length polymorphism assay for analyzing VDR rs2228570 polymorphism.

<p>Lane 10 shows marker; Lanes 1, 2 and 3 show rs2228570 TC genotype; lanes 4, 5 and 6 show rs2228570 TT genotype; lanes 7, 8 and 9 show rs2228570 CC genotypes.</p