259 research outputs found
Characterization of bacterial diversity and screening of cellulose-degrading bacteria in the gut system of Glenea cantor (Fabricius) larvae
The intestinal bacteria of longhorn beetles would be ideal targets for pest control and lignocellulosic resources by destroying or exploiting their cellulose-degrading function. This article aims to investigate the diversity and community structure of intestinal bacteria the oligophagous longhorn beetle Glenea cantor. Additionally, it seeks to identify the presence of lignocellulose-degrading bacteria in the gut, and explore their role in consuming host kapok trees Bombax malabaricum. In this study, the bacterial community from G. cantor was examined by Illumina sequencing of 16S ribosomal RNA (rRNA) targeting the V3 and V4 regions. A total of 563,201 valid sequences and 814 OTUs were obtained. The dominant phyla were Proteobacteria, and the dominant genera were Acinetobacter and Lactococcus. The analysis of microbial diversity revealed a high bacterial diversity in the samples, with the gut bacteria playing a crucial role in the physiological activities of the host, particularly, 9 genera of intestinal bacteria with cellulose degradation function were found, highlighting their vital role in cellulose degradation. Five strains of cellulose-degrading bacteria, belonging to the genus Pseudomonas, were obtained from the intestinal tract of G. cantor larvae using traditional isolation and culture techniques as well as 16S rDNA sequencing. Among these strains, A4 exhibited a cellulase activity of 94.42 ± 0.42 U/mL, while A5 displayed the highest filter paper enzyme activity of 127.46 ± 3.54 U/mL. These results offered valuable insights into potential targets for pest control through internal attack digestion and cellulose-degrading bacteria in longhorn beetles
Latent Abnormal Pathology Affects Long-Term Graft Function in Elder Living Renal Allograft Recipients
Objective. This study evaluated the long-term effects and clinical significance of latent abnormal pathology on elder living donor kidney graft function after renal transplantation in China. Methods. One-hundred and thirty-eight living donor renal transplantations have been carried out at our hospital in recent years. Of these, 72 Time-Zero biopsies were performed and used in this analysis. Clinical data were retrospectively measured at 3, 6, 12, and 24 months after renal transplants. Relationships and effects from biopsy results taken from implanted donor kidney grafts were analyzed. Results. Time-Zero biopsy pathology results from donor kidneys showed that 48.61% of donor kidneys had latent abnormal changes; arterial lesions of donor kidneys had significant effects on the renal function of grafts after 2 years' transplantation; correlations between donor age and arterial lesions were significant; and Time-Zero biopsy pathology results could help predict the long-term function of a renal graft. Conclusions. Existing latent pathological changes of an elder living donor kidney before transplantation could affect long-term renal function. Whether a senior donor is used should be very carefully considered
Identification and characterization of a novel fumarase gene by metagenome expression cloning from marine microorganisms
<p>Abstract</p> <p>Background</p> <p>Fumarase catalyzes the reversible hydration of fumarate to <smcaps>L</smcaps>-malate and is a key enzyme in the tricarboxylic acid (TCA) cycle and in amino acid metabolism. Fumarase is also used for the industrial production of <smcaps>L</smcaps>-malate from the substrate fumarate. Thermostable and high-activity fumarases from organisms that inhabit extreme environments may have great potential in industry, biotechnology, and basic research. The marine environment is highly complex and considered one of the main reservoirs of microbial diversity on the planet. However, most of the microorganisms are inaccessible in nature and are not easily cultivated in the laboratory. Metagenomic approaches provide a powerful tool to isolate and identify enzymes with novel biocatalytic activities for various biotechnological applications.</p> <p>Results</p> <p>A plasmid metagenomic library was constructed from uncultivated marine microorganisms within marine water samples. Through sequence-based screening of the DNA library, a gene encoding a novel fumarase (named FumF) was isolated. Amino acid sequence analysis revealed that the FumF protein shared the greatest homology with Class II fumarate hydratases from <it>Bacteroides </it>sp. 2_1_33B and <it>Parabacteroides distasonis </it>ATCC 8503 (26% identical and 43% similar). The putative fumarase gene was subcloned into pETBlue-2 vector and expressed in <it>E. coli </it>BL21(DE3)pLysS. The recombinant protein was purified to homogeneity. Functional characterization by high performance liquid chromatography confirmed that the recombinant FumF protein catalyzed the hydration of fumarate to form <smcaps>L</smcaps>-malate. The maximum activity for FumF protein occurred at pH 8.5 and 55°C in 5 mM Mg<sup>2+</sup>. The enzyme showed higher affinity and catalytic efficiency under optimal reaction conditions: <it>K</it><sub>m</sub>= 0.48 mM, <it>V</it><sub>max </sub>= 827 μM/min/mg, and <it>k</it><sub>cat</sub>/<it>K</it><sub>m </sub>= 1900 mM/s.</p> <p>Conclusions</p> <p>We isolated a novel fumarase gene, <it>fumF</it>, from a sequence-based screen of a plasmid metagenomic library from uncultivated marine microorganisms. The properties of FumF protein may be ideal for the industrial production of <smcaps>L</smcaps>-malate under higher temperature conditions. The identification of FumF underscores the potential of marine metagenome screening for novel biomolecules.</p
Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size
Osteoporotic hip fracture (HF) is a serious global public health problem associated with high morbidity and mortality. Hip bone size (BS) has been identified as one of key measurable risk factors for HF, independent of bone mineral density (BMD). Hip BS is highly genetically determined, but genetic factors underlying BS variation are still poorly defined. Here, we performed an initial genome-wide copy number variation (CNV) association analysis for hip BS in 1,627 Chinese Han subjects using Affymetrix GeneChip Human Mapping SNP 6.0 Array and a follow-up replicate study in 2,286 unrelated US Caucasians sample. We found that a copy number polymorphism (CNP267) located at chromosome 2q12.2 was significantly associated with hip BS in both initial Chinese and replicate Caucasian samples with p values of 4.73E-03 and 5.66E-03, respectively. An important candidate gene, four and a half LIM domains 2 (FHL2), was detected at the downstream of CNP267, which plays important roles in bone metabolism by binding to several bone formation regulator, such as insulin-like growth factor-binding protein 5 (IGFBP-5) and androgen receptor (AR). Our findings suggest that CNP267 region may be associated with hip BS which might influence the FHL2 gene downstream
Construction and On-site Performance of the LHAASO WFCTA Camera
The focal plane camera is the core component of the Wide Field-of-view
Cherenkov/fluorescence Telescope Array (WFCTA) of the Large High-Altitude Air
Shower Observatory (LHAASO). Because of the capability of working under
moonlight without aging, silicon photomultipliers (SiPM) have been proven to be
not only an alternative but also an improvement to conventional photomultiplier
tubes (PMT) in this application. Eighteen SiPM-based cameras with square light
funnels have been built for WFCTA. The telescopes have collected more than 100
million cosmic ray events and preliminary results indicate that these cameras
are capable of working under moonlight. The characteristics of the light
funnels and SiPMs pose challenges (e.g. dynamic range, dark count rate,
assembly techniques). In this paper, we present the design features,
manufacturing techniques and performances of these cameras. Finally, the test
facilities, the test methods and results of SiPMs in the cameras are reported
here.Comment: 45 pages, 21 figures, articl
Does or did the supernova remnant Cassiopeia A operate as a PeVatron?
For decades, supernova remnants (SNRs) have been considered the prime sources
of Galactic Cosmic rays (CRs). But whether SNRs can accelerate CR protons to
PeV energies and thus dominate CR flux up to the knee is currently under
intensive theoretical and phenomenological debate. The direct test of the
ability of SNRs to operate as CR PeVatrons can be provided by ultrahigh-energy
(UHE; ~TeV) -rays. In this context, the historical
SNR Cassiopeia A (Cas A) is considered one of the most promising target for UHE
observations. This paper presents the observation of Cas A and its vicinity by
the LHAASO KM2A detector. The exceptional sensitivity of LHAASO KM2A in the UHE
band, combined with the young age of Cas A, enabled us to derive stringent
model-independent limits on the energy budget of UHE protons and nuclei
accelerated by Cas A at any epoch after the explosion. The results challenge
the prevailing paradigm that Cas A-type SNRs are major suppliers of PeV CRs in
the Milky Way.Comment: 11 pages, 3 figures, Accepted by the APJ
Measurement of ultra-high-energy diffuse gamma-ray emission of the Galactic plane from 10 TeV to 1 PeV with LHAASO-KM2A
The diffuse Galactic -ray emission, mainly produced via interactions
between cosmic rays and the interstellar medium and/or radiation field, is a
very important probe of the distribution, propagation, and interaction of
cosmic rays in the Milky Way. In this work we report the measurements of
diffuse -rays from the Galactic plane between 10 TeV and 1 PeV
energies, with the square kilometer array of the Large High Altitude Air Shower
Observatory (LHAASO). Diffuse emissions from the inner
(, ) and outer
(, ) Galactic plane are detected with
and significance, respectively. The outer Galactic
plane diffuse emission is detected for the first time in the very- to
ultra-high-energy domain (~TeV). The energy spectrum in the inner Galaxy
regions can be described by a power-law function with an index of
, which is different from the curved spectrum as expected from
hadronic interactions between locally measured cosmic rays and the
line-of-sight integrated gas content. Furthermore, the measured flux is higher
by a factor of than the prediction. A similar spectrum with an index of
is found in the outer Galaxy region, and the absolute flux for
TeV is again higher than the prediction for hadronic
cosmic ray interactions. The latitude distributions of the diffuse emission are
consistent with the gas distribution, while the longitude distributions show
clear deviation from the gas distribution. The LHAASO measurements imply that
either additional emission sources exist or cosmic ray intensities have spatial
variations.Comment: 12 pages, 8 figures, 5 tables; accepted for publication in Physical
Review Letters; source mask file provided as ancillary fil
Structure and bonding in WCn (n = 2–5) clusters
Stochastic explorations of the configurational spaces for WC n (n = 2–5) clusters lead to densely populated spin states at each molecularity. We found 8, 16, 42, and 68 well-defined minima for n = 2, 3, 4, 5, respectively, in spin states ranging from singlets to quintuplets. The lowest energy isomers are triplets in all cases, except for n = 2 where there is competition between a quintuplet and a triplet state for the global minimum. The transition from planar to 3D structural preferences occurs between n = 4 and n = 5. For the global minima, the structures may be considered as the result of the interaction between two fragments: a tungsten cation and a covalently bonded anionic carbon chain. We found that spin–orbit (SO) effects reduce energy differences among isomers. Likewise, SO effects diminish as a function of the carbon content in the clusters to the point that for n = 5 they become negligible
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