Genetic characterization of fungal biodiversity in storage grains : towards enhancing food safety in northern Uganda

Worldwide fungal contamination leads to both quantitative and qualitative grain losses during crop growth and/or storage. A greater proportion of grains contamination with toxins often occurs in sub-Saharan Africa, where control measures are limited. We determined fungal diversity and their toxin production ability in household grains meant for human consumption to highlight the risk of mycotoxin exposure among people from northern Uganda. The study underlines the high diversity of fungi that group into 15 genera; many of which are plant pathogens with toxigenic potential. Fusarium verticillioides was the most common fungal species isolated from household grains. The study also indicates that northern Uganda is favored by a high proportion of toxigenic isolates of F. verticillioides, F. andiyazi, and F. proliferatum, which are characterized by a high fumonisins production capability. The fumonisins production ability was not dependent on the species, grain types, and haplotype group to which the isolates belong. The contamination of most household grains with fungi capable of producing a high amount of toxin shows that most people are exposed to an elevated amount of mycotoxins, which shows the frequent problems with mycotoxins that have been reported in most parts of sub-Saharan Africa

Mycotoxin profile of staple grains in northern Uganda : understanding the level of human exposure and potential risks

Mycotoxins are toxic metabolites of fungi that contaminate food and feed. These toxins can cause acute and chronic health threats to both humans and animals. In sub-Saharan Africa, exposure to mycotoxins is chronic and under-reported. The study explores contamination of grains (sorghum, maize, groundnut, millet) with four mycotoxins (aflatoxins, fumonisins, ochratoxins, and deoxynivalenol) and dietary exposure to quantify associated health risks in northern Uganda. The results underscored the high prevalence of mycotoxins, only 7% of the samples were free from toxins. Sorghum grains seemed to be the most susceptible to toxin contamination, whereas in millet the toxin levels were, in general, the lowest. Besides, the results showed that the majority of grains were contaminated with more than one mycotoxin and that the toxin pattern was dependent on the grain type. Co-contamination with all four mycotoxins mainly occurred in sorghum grains. Besides the differences between grain types, there were also significant differences in toxins levels depending on the district where the grains came from. The estimated daily intakes for the mycotoxins were far above the recommended tolerable daily intake (TDI), especially for sorghum. So, it can be concluded that the majority of the people whose diet is mainly based on sorghum are exposed to multiple mycotoxins in a single diet and at a dose above the TDI. Such exposure to multiple mycotoxins elevates the associated health risks. Millet grains, which were the least contaminated, can provide an alternative to sorghum. However, to tackle the mycotoxin problem, other control and prevention mechanisms, e.g. good agricultural practices and optimized storage must be further explored and implemented in sub-Saharan Africa

Prevalence of sweetpotato viruses in Acholi sub-region, northern Uganda

The purpose of the study was to identify different viruses infecting sweetpotato and the level of co-infection and spatial distribution of the viruses within the Acholi sub-region of northern Uganda. Multiplex PCR was used to screen and determine level of co-infection in 380 sweetpotato plants. The PCR scores were computed to give overall frequency of occurrence of different viruses. The spatial distribution of viruses was represented on an ArcGIS map. Of all screened samples, 24% (92/380) were infected with at least one virus. Sweetpotato feathery mottle virus (65/92), sweetpotato chlorotic fleck virus (17/92) and sweetpotato mild mottle virus (8/92) were the most frequent viruses detected. Of sampled fields, 74% (28/38) had at least one virus-infected sweetpotato plant. The four viruses detected are the major viruses causing significant yield losses in major sweetpotato growing regions of Uganda and East Africa. The findings of limited distribution and low prevalence of the viruses in the region indicate it causes less burden to sweetpotato production in the sub-region compared with other parts of Uganda. Keywords: Sweetpotato mild mottle virus, Sweetpotato chlorotic fleck virus, Chlorotic fleck virus, Northern Ugand

Characterization of Ugandan endemic Aspergillus species and identification of non-aflatoxigenic isolates for potential biocontrol of aflatoxins

Acute stunting in children, liver cancer, and death often occur due to human exposure to aflatoxins in food. The severity of aflatoxin contamination depends on the type of Aspergillus fungus infecting the crops. In this study, Aspergillus species were isolated from households' staple foods and were characterized for different aflatoxin chemotypes. The non-aflatoxigenic chemotypes were evaluated for their ability to reduce aflatoxin levels produced by aflatoxigenic A. flavus strains on maize grains. Aspergillus flavus (63%), A. tamarii (14%), and A. niger (23%) were the main species present. The A. flavus species included isolates that predominantly produced aflatoxins B1 and B2, with most isolates producing a high amount (>20 ug/mu L) of aflatoxin B1 (AFB1), and a marginal proportion of them also producing G aflatoxins with a higher level of aflatoxin G1 (AFG1) than AFB1. Some non-aflatoxigenic A. tamarii demonstrated a strong ability to reduce the level of AFB1 by more than 95% when co-inoculated with aflatoxigenic A. flavus. Therefore, field evaluation of both non-aflatoxigenic A. flavus and A. tamarii would be an important step toward developing biocontrol agents for mitigating field contamination of crops with aflatoxins in Uganda