Plasma Physics

Contains reports on three research projects.U. S. Atomic Energy Commission (Contract AT(30-1)-1842)U. S. Air Force (Electronic Systems Division) under Contract AF19(604)-599

3-D Models of Embedded High-Mass Stars: Effects of a Clumpy Circumstellar Medium

We use 3-D radiative transfer models to show the effects of clumpy circumstellar material on the observed infrared colors of high mass stars embedded in molecular clouds. We highlight differences between 3-D clumpy and 1-D smooth models which can affect the interpretation of data. We discuss several important properties of the emergent spectral energy distribution (SED): More near-infrared light (scattered and direct from the central source) can escape than in smooth 1-D models. The near- and mid-infrared SED of the same object can vary significantly with viewing angle, depending on the clump geometry along the sightline. Even the wavelength-integrated flux can vary with angle by more than a factor of two. Objects with the same average circumstellar dust distribution can have very different near-and mid-IR SEDs depending on the clump geometry and the proximity of the most massive clump to the central source. Although clumpiness can cause similar objects to have very different SEDs, there are some observable trends. Near- and mid-infrared colors are sensitive to the weighted average distance of clumps from the central source and to the magnitude of clumpy density variations (smooth-to-clumpy ratio). Far-infrared emission remains a robust measure of the total dust mass. We present simulated SEDs, colors, and images for 2MASS and Spitzer filters. We compare to observations of some UCHII regions and find that 3-D clumpy models fit better than smooth models. In particular, clumpy models with fractal dimensions in the range 2.3-2.8, smooth to clumpy ratios of <50%, and density distributions with shallow average radial density profiles fit the SEDs best.Comment: accepted to ApJ; version with full-res figures: http://www.astro.virginia.edu/~ri3e/clumpy3d.pd

Radio Astronomical Polarimetry and the Lorentz Group

In radio astronomy the polarimetric properties of radiation are often modified during propagation and reception. Effects such as Faraday rotation, receiver cross-talk, and differential amplification act to change the state of polarized radiation. A general description of such transformations is useful for the investigation of these effects and for the interpretation and calibration of polarimetric observations. Such a description is provided by the Lorentz group, which is intimately related to the transformation properties of polarized radiation. In this paper the transformations that commonly arise in radio astronomy are analyzed in the context of this group. This analysis is then used to construct a model for the propagation and reception of radio waves. The implications of this model for radio astronomical polarimetry are discussed.Comment: 10 pages, accepted for publication in Astrophysical Journa

RAPID THERMOCYCLER SYSTEM FOR RAPID AMPLIFICATION OF NUCLEIC ACIDS AND RELATED METHODS

A thermo cycling device and method of operating a thermocycler instrument, the instrument including a sample holder, at least one thermal cycling element, and at least one first and second temperature sensors, for causing the sample holder containing the at least one sample to undergo polymerase chain reaction amplification by repeated cycling between at least a denaturation heating stage and an aunealing cooling stage. The first temperature corresponding with the temperature of the sample holder is monitored using the at least one first temperature sensor, and a second temperature corresponding with the temperature external of the sample holder is monitored using the at least one second temperature sensor. Based upon the first temperature and the second temperature, the power that is delivered to the at least one thermal cycling element of the instrument is dynamically controlled

Plasma Physics

Contains reports on two research projects.United States Atomic Energy Commission (Contract AT(30-1)-1842)United States Air Force, Electronic Systems Division (Contract AF19(604)-5992)National Science Foundation (Grant G-24073

Calf pre-weaning traits and immunoglobulin response to bovine viral diarrhea virus vaccination

Calfhood vaccination for bovine viral diarrhea virus (BVDV) is a relatively new concept, and protocols are evolving. Our objective was to determine effects of BVDV type I vaccination protocol, calf behavior (chute score, and chute exit velocity), and gender on calf gain and immunoglobulin (Ig) response. Crossbred calves (n = 64) were randomly allotted to one of two vaccination protocols. In protocol 1, calves were vaccinated at 60 d of age (d 0) and at weaning (d 147). Calves assigned to protocol 2 were vaccinated against BVDV type I at 21 d prior to (d 126) and at weaning (d 147). Blood samples were collected from half of the calves in each protocol group on d 0 (60 days of age), d 21, d 126 (21 days prior to weaning), and d 147 (at weaning); serum was harvested and Ig titers were determined. Titers for BVDV type I were transformed (log base 2) and analyzed using a mixed model procedure. Calves vaccinated at d 0 and weaning had larger (P \u3c 0.0001) titers than calves vaccinated at d 126 and weaning (7.5 ± 0.36 and 5.1 ± 0.36, respectively). Mean BVDV titers were larger (P \u3c 0.0001) on d 147 when compared with d 126, d 21, and d 0 (8.3 ± 0.39, 5.1 ± 0.40, 5.9 ± 0.39 and 5.7 ± 0.39, respectively). A treatment × day interaction (P \u3c 0.0001) also affected BVDV titers. However, BVDV titers were not affected (P \u3e 0.05) by calf gender, chute score, or chute exit velocity. Weaning weight and pre-weaning average daily gain (ADG) were not related to BVDV type I titers. This study indicated that vaccinating beef calves against BVDV was effective in triggering an Ig response. Furthermore, our results suggest that calves should be vaccinated against BVDV type I at 60 d of age for greater disease resistance