Topological invariants for holographic semimetals

We study the behavior of fermion spectral functions for the holographic topological Weyl and nodal line semimetals. We calculate the topological invariants from the Green functions of both holographic semimetals using the topological Hamiltonian method, which calculates topological invariants of strongly interacting systems from an effective Hamiltonian system with the same topological structure. Nontrivial topological invariants for both systems have been obtained and the presence of nontrivial topological invariants further supports the topological nature of the holographic semimetals.Comment: 39 pages, 11 figures, 1 table; v2: match published versio

Topological nodal line semimetals in holography

We show a holographic model of a strongly coupled topological nodal line semimetal (NLSM) and find that the NLSM phase could go through a quantum phase transition to a topologically trivial state. The dual fermion spectral function shows that there are multiple Fermi surfaces each of which is a closed nodal loop in the NLSM phase. The topological structure in the bulk is induced by the IR interplay between the dual mass operator and the operator that deforms the topology of the Fermi surface. We propose a practical framework for building various strongly coupled topological semimetals in holography, which indicates that at strong coupling topologically nontrivial semimetal states generally exist.Comment: 21 pages, 5 figures; v2: match published versio

A Kinetic Model for Cell Damage Caused by Oligomer Formation

It is well-known that the formation of amyloid fiber may cause invertible damage to cells, while the underlying mechanism has not been fully uncovered. In this paper, we construct a mathematical model, consisting of infinite ODEs in the form of mass-action equations together with two reaction-convection PDEs, and then simplify it to a system of 5 ODEs by using the maximum entropy principle. This model is based on four simple assumptions, one of which is that cell damage is raised by oligomers rather than mature fibrils. With the simplified model, the effects of nucleation and elongation, fragmentation, protein and seeds concentrations on amyloid formation and cell damage are extensively explored and compared with experiments. We hope that our results can provide a valuable insight into the processes of amyloid formation and cell damage thus raised.Comment: 16 pages+ 5 figures for maintext; 8 pages+ 4 figures for Supporting Material