Probabilities of QTL genotypes conditional upon the genotype of flanking markers in a DH (or RI) population.

<p>Note: <i>r</i>₁, <i>r</i>₂ and <i>r</i> are the recombination fractions between left marker A and QTL, between QTL and right marker B and between the two flanking markers. For RI population, <i>r</i> is replaced by an adjusted recombination fraction: <i>R</i> = 2<i>r</i>/(1+2<i>r</i>) for selfing and <i>R</i> = 4<i>r</i>/(1+6<i>r</i>) for brother-sister mating (similarly for <i>r</i>₁ and <i>r</i>₂).</p

Simulation results of iQTL mapping under different heritabilities and different population sizes.

<p>Simulation results of iQTL mapping under different heritabilities and different population sizes.</p

Imprinting types and their definitions.

<p>Imprinting types and their definitions.</p

Simulation results of genome-wide iQTL mapping based on a low-density genetic map (using IM and CIM methods) and an ultrahigh-density genetic map (using PM and CPM methods), respectively.

<p>Simulation results of genome-wide iQTL mapping based on a low-density genetic map (using IM and CIM methods) and an ultrahigh-density genetic map (using PM and CPM methods), respectively.</p

Simulation results of genome-wide iQTL mapping using a conventional low-density genetic map (A) and an ultrahigh-density map (B), respectively.

<p>The horizontal lines indicate the significance threshold at the overall significance level of 0.05. The black and white triangles indicate the positions of iQTLs and non-imprinted QTLs, respectively.</p

Amounts of endogenous ABA and ABA metabolites in plants under control conditions, drought treatment, and after rewatering

<p><b>Copyright information:</b></p><p>Taken from "The relationship of drought-related gene expression in to hormonal and environmental factors"</p><p></p><p>Journal of Experimental Botany 2008;59(11):2991-3007.</p><p>Published online 13 Jun 2008</p><p>PMCID:PMC2504347.</p><p></p

(a) Changes in ABA and ABA metabolite concentrations in ABA-treated plants

(b) Changes in ABA, ABA metabolites, and PBI425 concentrations in PBI425-treated plants.<p><b>Copyright information:</b></p><p>Taken from "The relationship of drought-related gene expression in to hormonal and environmental factors"</p><p></p><p>Journal of Experimental Botany 2008;59(11):2991-3007.</p><p>Published online 13 Jun 2008</p><p>PMCID:PMC2504347.</p><p></p

Responses of 1969 drought-regulated genes to drought (left panel) and rehydration (right panel)

Each spot corresponds to an individual gene, and the number of genes with a given ratio is plotted on the -axis. The colour of each spot is based on the relative expression in drought versus control (left panel); red, up-regulated; blue, down-regulated.<p><b>Copyright information:</b></p><p>Taken from "The relationship of drought-related gene expression in to hormonal and environmental factors"</p><p></p><p>Journal of Experimental Botany 2008;59(11):2991-3007.</p><p>Published online 13 Jun 2008</p><p>PMCID:PMC2504347.</p><p></p

Clustering of 641 drought and plant hormone overlapping genes to show commonalities between treatments

Hormone data are from .<p><b>Copyright information:</b></p><p>Taken from "The relationship of drought-related gene expression in to hormonal and environmental factors"</p><p></p><p>Journal of Experimental Botany 2008;59(11):2991-3007.</p><p>Published online 13 Jun 2008</p><p>PMCID:PMC2504347.</p><p></p

(a) Clustering of 1310 drought and ABA overlapping genes according to their expression after drought, rehydration, ABA, and PBI425 treatments

The colour scale indicates the degree of gene expression change. ABA and PBI425 data are from . (b) Clustering of 496 drought and ABA overlapping genes. ABA data are from .<p><b>Copyright information:</b></p><p>Taken from "The relationship of drought-related gene expression in to hormonal and environmental factors"</p><p></p><p>Journal of Experimental Botany 2008;59(11):2991-3007.</p><p>Published online 13 Jun 2008</p><p>PMCID:PMC2504347.</p><p></p