Virtual prototyping with surface reconstruction and freeform geometric modeling using level-set method

More and more products with complex geometries are being designed and manufactured by computer aided design (CAD) and rapid prototyping (RP) technologies. Freeform surface is a geometrical feature widely used in modern products like car bodies, airfoils and turbine blades as well as in aesthetic artifacts. How to efficiently design and generate digital prototypes with freeform surfaces is an important issue in CAD. This paper presents the development of a Virtual Sculpting system and addresses the issues of surface reconstruction from dexel data structures and freeform geometric modeling using the level-set method from distance field structure. Our virtual sculpting method is based on the metaphor of carving a solid block into a 3D freeform object using a 3D haptic input device integrated with the computer visualization. This dissertation presents the result of the study and consists primarily of four papers --Abstract, page iv

A New Contour Reconstruction Approach from Dexel Data in Virtual Sculpting

This paper presents a novel method of contour reconstruction from dexel data solving the shape anomalies for the complex geometry in virtual sculpting. Grouping and traversing processes are developed to find connectivity between dexels along every two adjacent rays. After traveling through all the rays on one slice, sub-boundaries are connected into full boundaries which are desired contours. The complexity of the new method has been investigated and determined as O(n). We also demonstrate the ability of the described method for viewing a sculpted model from different directions

Intralayer Negative Poisson's Ratio in Two-Dimensional Black Arsenic by Strain Engineering

Negative Poisson's ratio as the anomalous characteristic generally exists in artificial architectures, such as re-entrant and honeycomb structures. The structures with negative Poisson's ratio have attracted intensive attention due to their unique auxetic effect and many promising applications in shear resistant and energy absorption fields. However, experimental observation of negative Poisson's ratio in natural materials barely happened, although various two-dimensional layered materials are predicted in theory. Herein, we report the anisotropic Raman response and the intrinsic intralayer negative Poisson's ratio of two-dimensional natural black arsenic (b-As) via strain engineering strategy. The results were evident by the detailed Raman spectrum of b-As under uniaxial strain together with density functional theory calculations. It is found that b-As was softer along the armchair than zigzag direction. The anisotropic mechanical features and van der Waals interactions play essential roles in strain-dependent Raman shifts and negative Poisson's ratio in the natural b-As along zigzag direction. This work may shed a light on the mechanical properties and potential applications of two-dimensional puckered materials.Comment: 23 pages, 4 figure

A novel clinical−radiomic nomogram for the crescent status in IgA nephropathy

ObjectiveWe used machine-learning (ML) models based on ultrasound radiomics to construct a nomogram for noninvasive evaluation of the crescent status in immunoglobulin A (IgA) nephropathy.MethodsPatients with IgA nephropathy diagnosed by renal biopsy (n=567) were divided into training (n=398) and test cohorts (n=169). Ultrasound radiomic features were extracted from ultrasound images. After selecting the most significant features using univariate analysis and the least absolute shrinkage and selection operator algorithm, three ML algorithms were assessed for final radiomic model establishment. Next, clinical, ultrasound radiomic, and combined clinical−radiomic models were compared for their ability to detect IgA crescents. The diagnostic performance of the three models was evaluated using receiver operating characteristic curve analysis.ResultsThe average area under the curve (AUC) of the three ML radiomic models was 0.762. The logistic regression model performed best, with AUC values in the training and test cohorts of 0.838 and 0.81, respectively. Among the final models, the combined model based on clinical characteristics and the Rad score showed good discrimination, with AUC values in the training and test cohorts of 0.883 and 0.862, respectively. The decision curve analysis verified the clinical practicability of the combined nomogram.ConclusionML classifier based on ultrasound radiomics has a potential value for noninvasive diagnosis of IgA nephropathy with or without crescents. The nomogram constructed by combining ultrasound radiomic and clinical features can provide clinicians with more comprehensive and personalized image information, which is of great significance for selecting treatment strategies

A bibliometric and knowledge-map analysis of the glymphatic system from 2012 to 2022

ObjectiveTo explore the development context, research hotspots and frontiers in the glymphatic system (GS) field from 2012 to 2022 by bibliometric analysis.MethodsThe Web of Science Core Collection (WoSCC) database was searched for articles published between 2012 and 2022. Microsoft Excel was used to manage the data. VOSviewer, CiteSpace, GraphPad Prism, the Web of Science, and an online analysis platform for bibliometrics (http://bibliometric.com/) were used to analyze the countries, institutions, journals, and collaboration networks among authors and the types of articles, developmental directions, references, and top keywords of published articles.ResultsA total of 412 articles were retrieved, including 39 countries/regions, 223 research institutes and 171 academic journals. The subject classifications related to the GS were Neuroscience, Clinical Neuroscience and Radiology/Nuclear Medicine/Medical Imaging. The United States has maintained its dominant and most influential position in GS research. Among research institutions and journals, the Univ Rochester and Journal of Cerebral Blood Flow and Metabolism had the highest number of academic articles, respectively. Nedergaard M had the most published article, and Iliff JJ had the most co-citations. The top two keywords with the highest frequency were “glymphatic system” and “cerebrospinal fluid.”ConclusionThis research provides valuable information for the study of the GS. The bibliometric analysis of this area will encourage potential collaborations among researchers, defining its frontiers and directions for development

Sedimentary ancient DNA reveals past ecosystem and biodiversity changes on the Tibetan Plateau: Overview and prospects

Alpine ecosystems on the Tibetan Plateau are being threatened by ongoing climate warming and intensified human activities. Ecological time-series obtained from sedimentary ancient DNA (sedaDNA) are essential for understanding past ecosystem and biodiversity dynamics on the Tibetan Plateau and their responses to climate change at a high taxonomic resolution. Hitherto only few but promising studies have been published on this topic. The potential and limitations of using sedaDNA on the Tibetan Plateau are not fully understood. Here, we (i) provide updated knowledge of and a brief introduction to the suitable archives, region-specific taphonomy, state-of-the-art methodologies, and research questions of sedaDNA on the Tibetan Plateau; (ii) review published and ongoing sedaDNA studies from the Tibetan Plateau; and (iii) give some recommendations for future sedaDNA study designs. Based on the current knowledge of taphonomy, we infer that deep glacial lakes with freshwater and high clay sediment input, such as those from the southern and southeastern Tibetan Plateau, may have a high potential for sedaDNA studies. Metabarcoding (for microorganisms and plants), metagenomics (for ecosystems), and hybridization capture (for prehistoric humans) are three primary sedaDNA approaches which have been successfully applied on the Tibetan Plateau, but their power is still limited by several technical issues, such as PCR bias and incompleteness of taxonomic reference databases. Setting up high-quality and open-access regional taxonomic reference databases for the Tibetan Plateau should be given priority in the future. To conclude, the archival, taphonomic, and methodological conditions of the Tibetan Plateau are favorable for performing sedaDNA studies. More research should be encouraged to address questions about long-term ecological dynamics at ecosystem scale and to bring the paleoecology of the Tibetan Plateau into a new era

Surface Reconstruction from Triple Dexel Model for Virtual Sculpting

This paper presents a novel method for surface reconstruction from triple dexel data for virtual sculpting. A triple dexel based virtual sculpting system is developed to provide the capability of interactive solid modeling with haptic interface. A solid model is converted to triple dexel data, which depicts the intersections of the solid with rays cast in three orthogonal directions, and modified during the virtual sculpting process. The boundary of the tool swept volume is computed based on the Sweep Differential Equation method. Contour generation and combination algorithms convert the triple dexel data to three sets of orthogonal slices of contours. A tiling algorithm then generates the solid\u27s boundary surface in triangular facets from these contours. Examples are given to demonstrate the ability of the developed method and software to realistically simulate the physical sculpting process and to allow viewing the sculpted models in any directions