Randomization test and correlation effects in high dimensional data

Master of ScienceDepartment of StatisticsGary GadburyHigh-dimensional data (HDD) have been encountered in many fields and are characterized by a “large p, small n” paradigm that arises in genomic, lipidomic, and proteomic studies. This report used a simulation study that employed basic block diagonal covariance matrices to generate correlated HDD. Quantities of interests in such data are, among others, the number of ‘significant’ discoveries. This number can be highly variable when data are correlated. This project compared randomization tests versus usual t-tests for testing of significant effects across two treatment conditions. Of interest was whether the variance of the number of discoveries is better controlled in a randomization setting versus a t-test. The results showed that the randomization tests produced results similar to that of t-tests

Efficient Multi-way Theta-Join Processing Using MapReduce

Multi-way Theta-join queries are powerful in describing complex relations and therefore widely employed in real practices. However, existing solutions from traditional distributed and parallel databases for multi-way Theta-join queries cannot be easily extended to fit a shared-nothing distributed computing paradigm, which is proven to be able to support OLAP applications over immense data volumes. In this work, we study the problem of efficient processing of multi-way Theta-join queries using MapReduce from a cost-effective perspective. Although there have been some works using the (key,value) pair-based programming model to support join operations, efficient processing of multi-way Theta-join queries has never been fully explored. The substantial challenge lies in, given a number of processing units (that can run Map or Reduce tasks), mapping a multi-way Theta-join query to a number of MapReduce jobs and having them executed in a well scheduled sequence, such that the total processing time span is minimized. Our solution mainly includes two parts: 1) cost metrics for both single MapReduce job and a number of MapReduce jobs executed in a certain order; 2) the efficient execution of a chain-typed Theta-join with only one MapReduce job. Comparing with the query evaluation strategy proposed in [23] and the widely adopted Pig Latin and Hive SQL solutions, our method achieves significant improvement of the join processing efficiency.Comment: VLDB201