14 research outputs found

    Common sequence motifs of nascent chains engage the ribosome surface and trigger factor

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    In the cell, the conformations of nascent polypeptide chains during translation are modulated by both the ribosome and its associated molecular chaperone, trigger factor. The specific interactions that underlie these modulations, however, are still not known in detail. Here, we combine protein engineering, in-cell and in vitro NMR spectroscopy, and molecular dynamics simulations to explore how proteins interact with the ribosome during their biosynthesis before folding occurs. Our observations of α-synuclein nascent chains in living Escherichia coli cells reveal that ribosome surface interactions dictate the dynamics of emerging disordered polypeptides in the crowded cytosol. We show that specific basic and aromatic motifs drive such interactions and directly compete with trigger factor binding while biasing the direction of the nascent chain during its exit out of the tunnel. These results reveal a structural basis for the functional role of the ribosome as a scaffold with holdase characteristics and explain how handover of the nascent chain to specific auxiliary proteins occurs among a host of other factors in the cytosol

    Expression of genes for bone morphogenetic proteins BMP-2, BMP-4 and BMP-6 in various parts of the human skeleton

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    BACKGROUND: Differences in duration of bone healing in various parts of the human skeleton are common experience for orthopaedic surgeons. The reason for these differences is not obvious and not clear.METHODS: In this paper we decided to measure by the use of real-time RT-PCR technique the level of expression of genes for some isoforms of bone morphogenetic proteins (BMPs), whose role is proven in bone formation, bone induction and bone turnover. Seven bone samples recovered from various parts of skeletons from six cadavers of young healthy men who died in traffic accidents were collected. Activity of genes for BMP-2, -4 and -6 was measured by the use of fluorescent SYBR Green I.RESULTS: It was found that expression of m-RNA for BMP-2 and BMP-4 is higher in trabecular bone in epiphyses of long bones, cranial flat bones and corpus mandibulae then in the compact bone of diaphyses of long bones. In all samples examined the expression of m-RNA for BMP-4 was higher than for BMP-2.CONCLUSION: It was shown that m-RNA for BMP-6 is not expressed in the collected samples at all. It is postulated that differences in the level of activation of genes for BMPs is one of the important factors which determine the differences in duration of bone healing of various parts of the human skeleton.Author has checked copyrightDG 16/11/1

    Algebra with a symplectic form

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    Blue fluorescence of Ti3+ ions in Ti3+-doped, gamma-irradiated SrAl0.5Ta0.5O3:LaAlO3 crystals

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    Titanium-doped SrAl0.5Ta0.5O3: LaAlO3 (SAT:LA) perovskite solid solution single crystals were grown by the Czochralski method for two Ti concentrations: 1 wt.% (LSAT1) and 2 wt.% (LSAT2). It was stated that incorporation of Ti into SAT:LA crystal takes place in a non-uniform way. Ti3+ ions enter the crystal mainly in its conical part and mainly inside a thin (2-3 mm) layer within the crystal boundary. At room temperature, crystals from the conical part of the boule reveal strong absorption centered at about 529 nm for the case of LSAT1 single crystal while at about 451 and 651 nm for the case of LSAT2. Low temperature measurements have shown two absorption peaks centered at about 489 and 562 nm. Moreover, the 850 nm peak is clearly observed. The intensity of the above described absorption coefficient strongly depends on the dopant concentration and reaches even 80 cm-1. The above bands seem to be connected with non emitting Ti3+ centers. After g-irradiation, additional absorption is observed peaked at about 423 nm which gives two emission bands placed near 400 and 800 nm (375 nm excitation wavelength). They seem to be Ti3+ emissions coming from Ti3+ ions, occupying two different lattice octahedral positions one of which being octahedral (Al, Ta) site. Blue fluorescence is self-evident

    Fluvastatin increases tyrosinase synthesis induced by UVB irradiation of B16F10 melanoma cells.

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    Statins are widely used to lower plasma concentrations of lipids, e.g. cholesterol. One of the main effects of statin treatment is inhibition of hydroxymethyl glutaryl-coenzyme A reductase. The role of fluvastatin, a frequently used statin, was examined in potential modulation of tyrosinase (key enzyme of melanogenesis) synthesis. Levels of tyrosinase mRNA induced by UVB irradiation of B16F10 melanoma cell line were measured by real time PCR. Fluvastatin increases tyrosinase mRNA production induced by UVB irradiation in B16F10 melanoma cell line. Fluvastatin treatment may potentially influence melanin synthesis and protection against UV irradiation

    Infrared Imaging Fourier Transform Spectrometer as the Stand-Off Gas Detection System

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    The article presents the detection of gases using an infrared imaging Fourier-transform spectrometer (IFTS). The Telops company has developed the IFTS instrument HyperCam, which is offered as a short- or long-wave infrared device. The principle of HyperCam operation and methodology of gas detection has been shown in the paper, as well as theoretical evaluation of gas detection possibility. Calculations of the optical path between the IFTS device, cloud of gases and background have been also discussed. The variation of a signal reaching the IFTS caused by the presence of a gas has been calculated and compared with the reference signal obtained without the presence of a gas in IFTS's field of view. Verification of the theoretical result has been made by laboratory measurements. Some results of the detection of various types of gases has been also included in the paper
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