Molecular data attest to the occurrence of autochthonous daphnia pulex (Crustacea, branchiopoda) populations in Sicily, Italy

Biological invasions are known to be among the most important threats to the long-term conservation of native biota, and their effects might be even more difficult to contrast when they are cryptic, i.e., when the non-native invaders cannot be easily recognised based on morphology, and can thus be confused with native taxa. Such cryptic invasions are known to widely occur in the cladoceran genus Daphnia O.F. Müller, 1785, so that the actual distribution and status of most species and lineages need to be checked with a genetic approach. In the frame of this work, we investigated if the Sicilian populations of D. (Daphnia) pulex Leydig, 1860 belonged to the allochthonous North American lineage, which is known to occur in several regions of the Palearctic and Afrotropical biogeographical regions, or rather to the autochthonous European lineage of the species. The molecular results obtained, based on a fragment of the mitochondrial gene encoding for NADH subunit dehydrogenase 5 (ND5), allowed us to rule out the allochthonous status of the species, confirming the presence of autochthonous relictual lineages of D. pulex in Sicily. The native status of these populations is in agreement with their local distribution, limited to natural and poorly-impacted water bodies mostly located in wooded areas at medium and high altitudes. The current local distribution of D. pulex in Sicily is possibly linked to the end of the last glacial maximum and the onset of warmer climatic conditions in the early Holocene, which led the species to take refuge in colder microthermal refugia located at high altitudes, determining their current relictual distribution. se only

On the occurrence of the invasive Atlantic blue crab Callinectes sapidus Rathbun 1896 (Decapoda: Brachyura: Portunidae) in Sicilian inland waters

- The Atlantic blue crab Callinectes sapidus Rathbun 1896 is included among the worst invasive alien species in the Mediterranean Sea. Here we report the finding of the species in two Sicilian rivers, the Irminio and the Imera Meridionale, where it was collected up to 6 km distant from the river mouths. Although several records of the species are already available from Italy, this is the first evidence of the occurrence of this invasive crab this far from the coastline throughout the Country. In the light of the well-known impact of the Atlantic blue crab on the invaded water bodies, the monitoring of the species and appropriate mitigation strategies should be implemented in order to protect the threatened native biota of the Sicilian inland waters

Stand out from the crowd: Small-scale genetic structuring in the endemic sicilian pond turtle

The geographical pattern of genetic diversity was investigated in the endemic Sicilian pond turtle Emys trinacris across its entire distribution range, using 16 microsatellite loci. Overall, 245 specimens of E. trinacris were studied, showing high polymorphic microsatellite loci, with allele numbers ranging from 7 to 30. STRUCTURE and GENELAND analyses showed a noteworthy, geographically based structuring of the studied populations in five well-characterized clusters, supported by a moderate degree of genetic diversity (FST values between 0.075 and 0.160). Possible explanations for the genetic fragmentation observed are provided, where both natural and human-mediated habitat fragmentation of the Sicilian wetlands played a major role in this process. Finally, some conservation and management suggestions aimed at preventing the loss of genetic variability of the species are briefly reported, stressing the importance of considering the five detected clusters as independent Management Units

A comparative analysis of aquatic and polyethylene-associated antibiotic-resistant microbiota in the mediterranean sea

In this study, we evaluated the microbiome and the resistome profile of water and fragments of polyethylene (PE) waste collected at the same time from a stream and the seawater in a coastal area of Northwestern Sicily. Although a core microbiome was determined by sequencing of the V3–V4 region of the bacterial 16S rDNA gene, quantitative differences were found among the microbial communities on PE waste and the corresponding water samples. Our findings indicated that PE waste contains a more abundant and increased core microbiome diversity than the corresponding water samples. Moreover, PCR analysis of specific antibiotic resistance genes (ARGs) showed that PE waste harbors more ARGs than the water samples. Thus, PE waste could act as a carrier of antibiotic-resistant microbiota, representing an increased danger for the marine environment and living organisms, as well

Diversity and Distribution of the Inland Water Decapods of Sicily (Crustacea, Malacostraca)

The current knowledge of Sicilian inland water decapod malacostracans is scarce and an updated synopsis on species distribution is lacking. Therefore, we reviewed the checklist and recent distribution of Sicilian inland water decapods based on published and unpublished records and novel observations with the aim of providing an exhaustive repository, also to be used as a sound baseline for future surveys. Overall, five native decapod species occur in the study area, i.e., the atyid shrimp Atyaephyra desmarestii, the palaemonid shrimps Palaemon adspersus, P. antennarius, and P. elegans, and the freshwater crab Potamon fluviatile, and their current local distributions are described. In addition, three alien species were recorded: the common yabby Cherax destructor and the red swamp crayfish Procambarus clarkii, strictly linked to inland waters, and the Atlantic blue crab Callinectes sapidus, a mainly marine species that can also colonise the lower stretches of rivers and coastal brackish waters. The collected data suggest the existence of a partial segregation of native versus non-native species, with the latter currently confined to coastal water bodies and the lower stretches of rivers. Moreover, the exclusively freshwater caridean A. desmarestii and P. antennarius show a parapatric distribution in the study area, which may suggest the existence of mutual exclusion phenomena. The results obtained raise some concerns about the effects of alien species on the native biota, and dedicated monitoring and management strategies should be implemented in order to better understand and mitigate their impact

New distributional data on Haemogregarina stepanowi (Apicomplexa) and Placobdella costata (Hirudinea) parasitising the Sicilian pond turtle Emys trinacris (Testudines)

The host-parasite system "Emys trinacris - Placobdella costata - Haemogregarina stepanowi"is known for Sicily, but scarce information is available to date about the distribution of the two parasites P. costata and H. stepanowi on the island. Therefore, an extensive sampling effort through visual census and collection and analysis of blood smears of the endemic Sicilian pond turtle E. trinacris was carried out in 46 water bodies scattered throughout mainland Sicily. Our findings revealed that the distribution of both parasites is limited to the Nebrodi area, where the infection of H. stepanowi has shown a high incidence on the local turtle populations. Our data suggest no correlation between the current distribution of the two parasite species and environmental features. The current distribution of H. stepanowi and P. costata seems not to be relictual, but rather the outcome of a recent colonisation process. Considering the possible negative impact of both H. stepanowi and P. costata on their turtle host, their long-term effect on E. trinacris should be investigated

First record of Temnosewellia minor (Platyhelminthes, Temnocephalidae) in Sicily, with a plea for a re-examination of the identity of the publicly available molecular sequences of the genus

Ectosymbiotic temnocephalan flatworms belonging to the genus Temnosewellia were collected on Cherax destructor in an aquaculture farm in Sicily, Italy. This represents the first record of a temnocephalan species for the fauna of the island. Morphological and molecular identification of the collected specimens proved that they belong to the allochthonous species Temnosewellia minor, which was introduced along with crayfishes bred in aquaculture farms. The phylogenetic analyses carried out for the molecular identification of the Sicilian population highlighted some inconsistencies in the grouping of the Temnosewellia sequences available online, thus stressing the opportunity of a careful re-examination of the voucher samples and their identifications. The risks of its unwary introduction in the wild and the need of monitoring its possible impacts on native biota are briefly discussed

Multi-Locus Phylogenetic Analyses of the Almadablennius Clade Reveals Inconsistencies with the Present Taxonomy of Blenniid Fishes

We used a multi-locus phylogenetic approach (i.e., combining both mitochondrial and nuclear DNA fragments) to address some long-standing taxonomic inconsistencies within the diverse fish clade of Combtooth Blennies (Blenniidae—unranked clade Almadablennius). The obtained phylogenetic trees revealed some major inconsistencies in the current taxonomy of Parablennini, such as the paraphyletic status of the Salaria and Parablennius genera, casting some doubt regarding their actual phylogenetic relationship. Furthermore, a scarce-to-absent genetic differentiation was observed among the three species belonging to the genus Chasmodes. This study provides an updated taxonomy and phylogeny of the former genus Salaria, ascribing some species to the new genus Salariopsis gen. nov., and emphasizes the need for a revision of the genus Parablennius

New molecular data attest to the absence of cospeciation patterns between Placobdella costata (Fr. Müller, 1846) (Hirudinea) and freshwater turtles (Emys spp.) in Italy

The only Palearctic representative of the leech genus Placobdella Blanchard, 1893 is P. costata, an ectoparasite of freshwater turtles. To date, no conclusive evidence about the possible presence of coevolutionary patterns between this leech and its turtle hosts is available due to the paucity of DNA sequence data available for P. costata; moreover, comparative host data is also mostly lacking, making any inferences more difficult. The discovery of new populations of the species in northern Italy and Sicily allowed us to generate novel mitochondrial DNA sequences and to compare the topology of the resulting phylogenetic trees with the phylogeny of the turtle hosts occurring in the study area, i.e., Emys orbicularis and E. trinacris. The branching pattern of the phylogenetic tree for P. costata is not congruent with that of its turtle hosts, thus suggesting the lack of coevolutionary or cospeciation phenomena between these taxa. The lack of a coevolutionary pattern might be ascribed to the different dispersal ability of Placobdella costata and Emys spp. and to the host generality of the leech, as confirmed by the occurrence of P. costata on aquatic turtles belonging to the genus Mauremys in areas where Emys spp. are rare or absent. A single leech cytochrome c oxidase subunit 1 haplotype was found in each study region, and the overall nucleotide diversity was very low throughout the investigated distribution. This apparent lack of a clear phylogeographical pattern was unexpected in the P. costata populations occurring in the circum-Mediterranean areas, where the occurrence of high haplotype and nucleotide diversity is customary for most terrestrial and freshwater species. Based on the available data, we suggest a recent, post-glacial origin of the studied P. costata populations

Morphological and molecular characterization of three new parastenocarididae (Copepoda: Harpacticoida) from caves in Southern Italy

We describe three new parastenocaridid: Cottarellicaris sanctiangeli Bruno & Cottarelli sp. nov., Stammericaris vincentimariae Bruno & Cottarelli sp. nov. and Proserpinicars specincola Bruno & Cottarelli sp. nov., collected in the pools of five different caves located in Calabria (Southern Italy). We conducted a phylogenetic analysis based on the mitochondrial COI and ribosomal 18S sequences of C. sanctiangeli sp. nov. and S. vincentimariae sp. nov., and of four more species of Stammericaris and one Proserpinicaris available from literature. Based on the molecular study, the specimens of C. sanctiangeli sp. nov. are clearly separated from the species belonging to the closely-related genus Stammericaris. The morphological and molecular data indicate that the genera belonging to the two subfamilies Parastenocaridinae and Fontinalicaridinae form two monophyletic and distinct clades, thus supporting their status. We also provide insights on the genus Proserpinicaris based on morphological data only; in particular, the most important synapomorphic character of the genus, i.e., the taxonomic value of the hyaline structure inserted on the anterior surface of the male leg 4 basis, is discussed based on the development of the P4 endopod, as observed in the last copepodid stage of some species of this genus. Finally, we widen the biogeographic and ecological knowledge of the three genera