Classical R-Matrices and the Feigin-Odesskii Algebra via Hamiltonian and Poisson Reductions

We present a formula for a classical $r$-matrix of an integrable system obtained by Hamiltonian reduction of some free field theories using pure gauge symmetries. The framework of the reduction is restricted only by the assumption that the respective gauge transformations are Lie group ones. Our formula is in terms of Dirac brackets, and some new observations on these brackets are made. We apply our method to derive a classical $r$-matrix for the elliptic Calogero-Moser system with spin starting from the Higgs bundle over an elliptic curve with marked points. In the paper we also derive a classical Feigin-Odesskii algebra by a Poisson reduction of some modification of the Higgs bundle over an elliptic curve. This allows us to include integrable lattice models in a Hitchin type construction.Comment: 27 pages LaTe

Classes of fast and specific search mechanisms for proteins on DNA

Problems of search and recognition appear over different scales in biological systems. In this review we focus on the challenges posed by interactions between proteins, in particular transcription factors, and DNA and possible mechanisms which allow for a fast and selective target location. Initially we argue that DNA-binding proteins can be classified, broadly, into three distinct classes which we illustrate using experimental data. Each class calls for a different search process and we discuss the possible application of different search mechanisms proposed over the years to each class. The main thrust of this review is a new mechanism which is based on barrier discrimination. We introduce the model and analyze in detail its consequences. It is shown that this mechanism applies to all classes of transcription factors and can lead to a fast and specific search. Moreover, it is shown that the mechanism has interesting transient features which allow for stability at the target despite rapid binding and unbinding of the transcription factor from the target.Comment: 65 pages, 23 figure

Search reliability and search efficiency of combined Lévy–Brownian motion: long relocations mingled with thorough local exploration

A combined dynamics consisting of Brownian motion and Levy flights is exhibited by a variety of biological systems performing search processes. Assessing the search reliability of ever locating the target and the search efficiency of doing so economically of such dynamics thus poses an important problem. Here we model this dynamics by a one-dimensional fractional Fokker-Planck equation combining unbiased Brownian motion and Levy flights. By solving this equation both analytically and numerically we show that the superposition of recurrent Brownian motion and Levy flights with stable exponent α<1, by itself implying zero probability of hitting a point on a line, lead to transient motion with finite probability of hitting any point on the line. We present results for the exact dependence of the values of both the search reliability and the search efficiency on the distance between the starting and target positions as well as the choice of the scaling exponent α of the Levy flight component

Better Acquisition Management through Alternative Dispute Resolution (ADR) and Other Best Practices for Preventing and Resolving Bid Protests

Naval Postgraduate School Acquisition Research Progra

An analytic expression for the HBT extrinsic base-collector capacitance derived from S-parameter measurements

Direct extraction is the most accurate method for the determination of equivalent-circuits of heterojunction bipolar transistors (HBTs). However, previous work lacks an exact expression for the extrinsic base-collector capacitance, which models the distributed nature of the base. This paper gives the derivation of an exact expression for this capacitance. As a result, each intrinsic equivalent-circuit parameter is determined using a simple exact expression at each measured frequency. The expression is valid for both the hybrid- /spl pi/ and the physics-based T-topology equivalent circuits. Extraction results for InP- and GaAs-HBTs are given