Interactions of <i>Burkholderia terrae</i> with soil fungi:Mechanisms, gene expression patterns and ecological behavior of <i>Burkholderia terrae</i> BS001 during its interaction with <i>Lyophyllum</i> sp. strain Karsten and <i>Trichoderma asperellum</i> 302 in soil

Even though soil is a nutrient-limited environment, there are zones of high microbial activity. Mainly zones that are influenced by plants, fungi, or a combination of both, are of interest. The mycosphere (niche under the influence of fungi) is the zone where, in particular, bacterial-fungal interactions take place. In my thesis, I studied the interaction of the soil bacterium Burkholderia terrae with Lyophyllum sp. strain studied Karsten and Trichoderma asperellum 302. In particular, I studied the strategies used by B. terrae to interact with soil fungi, and its behavior in relation to the two fungal species. The analyses revealed that B. terrae possessed the necessary genetic information that is required for successfully interacting with fungi, including the flagellar motility, chemotaxis, protein secretion systems, biofilm formation and secondary metabolite synthesis genes. I also observed that under soil-mimicking conditions in the presence of Lyophyllum sp. strain Karsten, B. terrae expressed genes responsible for chemotaxis, energy generation and oxidative stress response. B. terrae was also able to sense the presence of fungi and fungal released compounds (chemoattractants) including oxalic acid and glycerol, in its surroundings by showing a chemotactic response towards these. In terms of the physical interactions with the fungi, B. terrae was able to attach to one of the anchoring sites present on the cell envelope of Lyophyllum sp. strain Karsten. The work presented in this thesis adds to the understanding of bacterial interactions with fungi in soil and highlights the importance of bacterial-fungal interactions for soil quality and health

EIMERIOSIS IN POULTRY OF RAWALPINDI/ISLAMABAD AREA

This study was designed to determine the prevalence of eimeriosis in poultry and identify potential risk factors for its spread in Rawalpindi/Islamabad area of Pakistan. Of 359 gut samples (suspected for harbouring eimeriosis) examined, 258 (71.86%) were found infected. Four species of Eimeria (E. maxima, 34.10%, E. tenella, 30.62%, E. mitis, 13.95% and E. necatrix, 7.75%) were recorded. The prevalence of eimeriosis was highest in the month of September (89.74%), while lowest during June (28.57%). The disease was more common at the farms where the litter was wet and not managed properly

An aggregator-based-strategy to minimize the cost of energy consumption by optimal utilization of energy resources in an apartment building

© 2019 IEEE. Buildings and transport consume two thirds of the total global energy. It is desirable to maximize the use of renewable generation in these sectors, and to optimize the use of that energy by managing diverse sources and loads. This is particularly challenging in high-density residential premises where the space for such infrastructure is limited, and storage can have significant impact on energy utilization and demand. In this paper, we have proposed an aggregator-based-strategy (ABS) to optimally utilize the available energy resources and storage in an apartment building with twenty households, each having an electric vehicle (EV), and an aggregated solar photovoltaic (PV) energy and stationary battery storage (BS) system. The strategy is flexible and can be applied to any building with EVs, solar PV and BS to minimize the cost of energy consumption without compromising the flexibility of energy usage or travel requirements. The model also accounts for the battery capacity degradation and its associated cost to make it more realistic. The model is evaluated using real data and the results show that the strategy not only reduces the cost of energy consumption but also reduces the amount of energy drawn from the grid significantly

Target Population Environments and Pest Distribution Modelling: An Approach towards Pest Prioritization and Preparedness

The transboundary crop pest and disease (P&D) outbreaks over large geographical regions jeopardizes the food security and have broad economic, social and environmental impacts. The upsurge of new crop P&D, such as fall armyworm; cassava mosaic and brown streak virus; banana fusarium wilt tropical race 4 and wheat stem rust Ug99 are having serious repercussions on agriculture. Climate change is, in part, responsible for food chain catastrophes arising from these transboundary P&D. However, there is clear evidence that climate change impacts are altering the distribution of crop P&D. Such accelerated events require more attention on a greater scale to strengthen food security and protect the livelihoods of poor and most vulnerable countries of the world. A well-defined P&D ranking and distribution will focus on supporting policy-making, integrated P&D management as well as tangible pre-emptive breeding strategies at large scale. Here, we have used chickpea homogenous systems units (HSUs) defined by mechanistic models and geo-bio-physical parameters; over which the P&D distribution and rankings were over-layered. The chickpea P&D severity, distributions, social impact and key drivers responsible for spread on these locations were identified by using meta-analysis. Further, in order to understand the possible risks and consequences of P&D population growth and geographical expansion, the CLIMEX package was used. We aim to compare the pest distribution generic models and prioritization methodologies for emerging regional specific P&D. These findings would support policy intrusions associated with long term transformative adaptation strategies for climate change

Identification of ionotrophic purinergic receptors in Huh-7 cells and their response towards structural proteins of HCV genotype 3a

Hepatitis C virus (HCV) is a major health problem in developing countries including Pakistan. Chronic HCV infection results in progressive liver disease including fibrosis, cirrhosis, insulin resistance and eventually hepatocellular carcinoma (HCC). Ionotrophic purinergic (P2X) receptors are identified to involve in a spectrum of physiological and pathophysiological processes. However, the role of P2X receptors in HCV liver associated diseases still remains to be investigated. The current study was designed to identify the presence of P2X receptors in human liver cells. Furthermore, it investigates the response of P2X receptors towards HCV structural proteins (E1E2). To determine that how many isoforms of P2X receptors are expressed in human liver cells, human hepatoma cell line (Huh-7) was used. Transcripts (mRNA) of five different isoforms of P2X receptors were identified in Huh-7 cells. To examine the gene expression of identified isoforms of P2X receptors in presence of HCV structural proteins E1E2, Huh-7/E1E2 cell line (stably expressing HCV structural proteins E1E2) was used. The results showed significant increase (6.2 fold) in gene expression of P2X4 receptors in Huh-7/E1E2 cells as compared to control Huh-7 cells. The findings of present study confirmed the presence of transcripts of five different isoforms of P2X receptors in human liver cells and suggest that P2X4 receptors could be represented an important component of the purinergic signaling complex in HCV induced liver pathogenesis

Artificial neural network led optimization of oxyhydrogen hybridized diesel operated engine

The prevailing massive exploitation of conventional fuels has staked the energy accessibility to future generations. The gloomy peril of inflated demand and depleting fuel reservoirs in the energy sector has supposedly instigated the urgent need for reliable alternative fuels. These very issues have been addressed by introducing oxyhydrogen gas (HHO) in compression ignition (CI) engines in various flow rates with diesel for assessing brake-specific fuel consumption (BSFC) and brake thermal efficiency (BTE). The enrichment of neat diesel fuel with 10 dm3/min of HHO resulted in the most substantial decrease in BSFC and improved BTE at all test speeds in the range of 1000– 2200 rpm. Moreover, an Artificial Intelligence (AI) approach was employed for designing an ANN performance-predicting model with an engine operating on HHO. The correlation coefficients (R) of BSFC and BTE given by the ANN predicting model were 0.99764 and 0.99902, respectively. The mean root errors (MRE) of both parameters (BSFC and BTE) were within the range of 1%–3% while the root mean square errors (RMSE) were 0.0122 kg/kWh and 0.2768% for BSFC and BTE, respec-tively. In addition, ANN was coupled with the response surface methodology (RSM) technique for comprehending the individual impact of design parameters and their statistical interactions gov-erning the output parameters. The R2 values of RSM responses (BSFC and BTE) were near to 1 and MRE values were within the designated range. The comparative evaluation of ANN and RSM predicting models revealed that MRE and RMSE of RSM models are also well within the desired range but to be outrightly accurate and precise, the choice of ANN should be potentially endorsed. Thus, the combined use of ANN and RSM could be used effectively for reliable predictions and effective study of statistical interactions

Building local capacities in the operation and management of an integrated solid waste management programme; Experience of Ampara District, Eastern Sri Lanka

Open dumping and burning of wastes in the environmental sensitive areas were common practices in almost all the local authorities in Ampara district. It had become a big threat to public health, the beautiful natural environment and to the local economy. The Local Authorities of the District often faced severe difficulties in the management of solid waste in an environmentally, socially and economically feasible manner. The lack of technical and financial capacities to apply and practice the newly developed waste management guidelines and policies further aggravated this situation.Having identified the gravity  and the importance of this serious environmental issue, the Department of Assistant Commissioner of Local Government of Ampara District, with the financial assistance of the European Union and the technical assistance of the United Nations Office for Project Services (UNOPS), is currently implementing an Integrated Solid Waste Management Programme (ISWMP) in 12 local authorities of the District. This ISWMP is completely being operated with the full coordination of the District Office of the Central Environmental Authority, Ampara. The UNOPS, as part of its technical assistance, has constructed solid waste management facilities such as 7 engineered landfills, one Waste Transfer Station, 4 Recycling Centers, 5 compost yards, well developed collection systems  as well as provided with capability building/training assistance aiming to establish an effective and efficient solid waste management system for the District. These  facilities are now completed,  already in use and operational. With these facilities in place, and with the continued support from UNOPS in providing institutional and capacity building assistance to the LA officers and staff, haphazard dumping and littering of waste in certain areas of the LAs have now been stopped. Thus 45,000 urban households or 58% of the total urban population are benefitted under thisprogramme with a total collection of 137tonnes of wastes per day through this programme. Out of this 137tonnes of waste, 59 tonnes are collected from cluster systems involving five local authorities while the balance from the other non-clustered Local Authorities.The paper will also present the processes and methodologies to improve the landfill practices from the open dumping practices to controlled tipping and then to engineered landfills  among the implementing local authorities. It will also highlight interventions/strategies to ensure sustainability of the operation and their management through the introduction of a User Fee system/Service Charge which is currently being implemented in 04  Local Authorities. This collected User Fee covers about 80% of cost of collection of waste which would otherwise been spent through their normal budget.Key words: Integrated Solid Waste Management, Ampara, haphazard dumping, controlled tipping, engineered landfill

SEIS: Insight's Seismic Experiment for Internal Structure of Mars.

By the end of 2018, 42 years after the landing of the two Viking seismometers on Mars, InSight will deploy onto Mars' surface the SEIS (Seismic Experiment for Internal Structure) instrument; a six-axes seismometer equipped with both a long-period three-axes Very Broad Band (VBB) instrument and a three-axes short-period (SP) instrument. These six sensors will cover a broad range of the seismic bandwidth, from 0.01&nbsp;Hz to 50&nbsp;Hz, with possible extension to longer periods. Data will be transmitted in the form of three continuous VBB components at 2 sample per second (sps), an estimation of the short period energy content from the SP at 1&nbsp;sps and a continuous compound VBB/SP vertical axis at 10&nbsp;sps. The continuous streams will be augmented by requested event data with sample rates from 20 to 100 sps. SEIS will improve upon the existing resolution of Viking's Mars seismic monitoring by a factor of ∼ 2500 at 1&nbsp;Hz and ∼ 200 000 at 0.1&nbsp;Hz. An additional major improvement is that, contrary to Viking, the seismometers will be deployed via a robotic arm directly onto Mars' surface and will be protected against temperature and wind by highly efficient thermal and wind shielding. Based on existing knowledge of Mars, it is reasonable to infer a moment magnitude detection threshold of M w ∼ 3 at 40 ∘ epicentral distance and a potential to detect several tens of quakes and about five impacts per year. In this paper, we first describe the science goals of the experiment and the rationale used to define its requirements. We then provide a detailed description of the hardware, from the sensors to the deployment system and associated performance, including transfer functions of the seismic sensors and temperature sensors. We conclude by describing the experiment ground segment, including data processing services, outreach and education networks and provide a description of the format to be used for future data distribution.Electronic supplementary materialThe online version of this article (10.1007/s11214-018-0574-6) contains supplementary material, which is available to authorized users