Mixed Data and Classification of Transit Stops

An analysis of the characteristics and behavior of individual bus stops can reveal clusters of similar stops, which can be of use in making routing and scheduling decisions, as well as determining what facilities to provide at each stop. This paper provides an exploratory analysis, including several possible clustering results, of a dataset provided by the Regional Transit Service of Rochester, NY. The dataset describes ridership on public buses, recording the time, location, and number of entering and exiting passengers each time a bus stops. A description of the overall behavior of bus ridership is followed by a stop-level analysis. We compare multiple measures of stop similarity, based on location, route information, and ridership volume over time

Longevity of Dayglo Fluorescent Particle Marker Used to Mark Birds in Flight Pen and Field

Spray application of fluorescent particles is a widely used and very valuable technique for marking birds. This remains one of the few practical means to mark large numbers of birds for monitoring movement, despite recent availability of a variety of more technologically advanced options. We monitored the longevity of the DayGlo fluorescent particle marker on red-winged blackbirds under simulated field conditions in a flight pen, and in an observational field experiment. In the pen study we banded 52 red-winged blackbirds with individually numbered leg bands, and sprayed them with DayGlo fluorescent particle marker from a distance of ~50 cm, on 1 December 2004. These birds were recaptured and DayGlo fluorescent particle marks assessed 11 times until 10 August 2005. All 31 surviving birds at the conclusion of the study (i.e. after 254 days) retained at least some DayGlo fluorescent particle marker on one or more body regions. Wings retained DayGlo fluorescent particle marks longer than other body regions and thus could be used to identify marks in large-scale collections. Roosting wild blackbirds aerially marked in September and October 2005 retained marks through June 2006, 263 days after marking. The formulation used is inexpensive (US$4.00 L-1), easy-to-apply at many scales and practical for many species (e.g. starlings, blackbirds, sparrows, gulls and shorebirds)

FLIP (Flice-like inhibitory protein) suppresses cytoplasmic double-stranded-RNA-induced apoptosis and NF-κB and IRF3-mediated signaling

<p>Abstract</p> <p>Background</p> <p>Cytoplasmic viral double-stranded RNA (dsRNA) is detected by a class of ubiquitous cytoplasmic RNA helicases, retinoic acid inducible gene-I (RIG-I) and melanoma differentiation antigen-5 (MDA5), which initiate a signaling cascade via their common adaptor called interferon-β (IFN-β) promoter stimulator-1 (IPS-1). This leads to the production of proinflammatory and antiviral cytokines, the type I Interferons, via mainly nuclear factor kappa B (NF-κB) and interferon response factor-3 (IRF3) transcription factors. Fas-associated death domain (FADD) protein, receptor-interacting protein (RIP1), caspase-8 and tumor necrosis factor receptor (TNFR)-associated death domain (TRADD) protein, all traditionally associated with death receptor signaling, are also involved in RIG-I/MDA5 signaling pathway. We previously showed that FLIP (Flice-like inhibitory protein), also designated as <it>cflar </it>(CASP8 and FADD-like apoptosis regulator), negatively regulates lipopolysaccharide (LPS)-induced toll-like receptor 4 (TLR4) signaling in endothelial cells and mouse embryonic fibroblasts (MEFs) and protected against TLR4-mediated apoptosis.</p> <p>Results</p> <p>In this study, we investigated the role of FLIP in cellular response to cytoplasmic polyinosinic:polycytidylic acid, poly(I:C), a synthetic analog of dsRNA. <it>C</it>onsistent with the previously described role of FADD in RIG-I/MDA5-mediated apoptosis, we found that FLIP^-/-MEFs were more susceptible to killing by cytoplasmic poly(I:C). However, FLIP^-/-MEFs also exhibited markedly increased expression of NF-κB-and IRF3- dependent genes in response to cytoplasmic poly(I:C). Importantly, reconstitution of FLIP in FLIP^-/-MEFs reversed the hyper-activation of IRF3- and NF-κB-mediated gene expression. Further, we found that caspase-8 catalytic activity was not required for cytoplasmic poly(I:C)-mediated NF-κB and IRF3 signaling.</p> <p>Conclusions</p> <p>These results provide evidence for a crucial dual role for FLIP in antiviral responses to cytoplasmic dsRNA: it protects from cytoplasmic dsRNA-mediated cell death while down-regulating IRF3-and NF-κB-mediated gene expression. Since the pathogenesis of several viral infections involves a heightened and dysregulated cytokine response, a possible therapy could involve modulating FLIP levels.</p

Evaluation of an Electronic Device for Reducing Damage by Pileated Woodpeckers to Wooden Utility Poles

Woodpecker damage to utility poles results in significant economic losses to utility companies. Pileated woodpeckers (Dryocopus pileatus), one of the largest woodpeckers in North America, can severely damage utility poles. Many types of repellent techniques have been evaluated for managing pileated woodpecker damage to utility poles. However, each technique has short-comings including cost, difficulty of installation, longevity of the product, or defeat by the woodpeckers. The Sonic Dissuader, a deterrent device, has shown some promise in field testing. We further evaluated the effectiveness of the device for deterring pileated woodpeckers from damaging utility poles in controlled flight pens at the National Wildlife Research Center, Fort Collins, Colorado. Birds spent similar time (F1.7 = 0.00, P = 0.9621) on poles with Sonic Dissuaders (6956.3 ± 1421.4 sec), and poles with the control device (8358.6 ± 1004.2 sec). Woodpeckers spent less time pecking on poles with the Sonic Dissuader (385.9 ± 69.1 sec) compared to control poles (1877.6 ± 494.2 sec) although the difference was not significant (F1.7 = 1.40, P = 0.2751). Weight of woodchips removed did not vary (t = -0.89, df= 14, P = 0.3887) between poles equipped with the Sonic Dissuader (54.7 ± 21.3 g) and poles equipped with the control device (101.0 ± 47.4 g), but weight of woodchips removed varied considerably by bird. We were also unable to detect a difference among times to departure after the 7 types of calls were emitted by the Sonic Dissuader (F6.8 = 1.14, P = 0.4216). Efficacy of the Sonic Dissuader might be improved by programming to broadcast whenever pecking occurs and by utilizing calls or sounds which have been evaluated for deterring woodpeckers from utility poles

Field Method for Analyzing Birds for Avicide 3-Chloro-P-Toluidine Hydrochloride

We developed a fast and simple method to detect presence or absence of DRC-1339 (CPTH: 3-Chloro-p-toluidine Hydrochloride) in birds that fed on DRC-1339 bait sites. We compared the effectiveness of the colorimetric method to the previously published analytical method using birds collected from DRC-1339 bait sites in Louisiana and Texas. We also conducted tests with caged red-winged blackbirds (Agelaius phoeniceus) to determine if time from consumption of DRC-1339-treated bait to death and time from death to colorimetric analysis affected test results. The colorimetric assay was effective in detecting the presence or absence of DRC-1339 in birds collected from bait sites. In the tests with caged birds, the method resulted in the detection of four grains of treated rice consumed up to 120 minutes post consumption, but failed to detect 1 grain of treated rice consumed at 120 minutes. Frozen samples of 4 treated consumed rice grains could be detected up to 90 days post collection

CLIVAR Mode Water Dynamics Experiment (CLIMODE) fall 2006 R/V Oceanus voyage 434 November 16, 2006–December 3, 2006

CLIMODE (CLIVAR Mode Water Dynamic Experiment) is a research program designed to understand and quantify the processes responsible for the formation and dissipation of North Atlantic subtropical mode water, also called Eighteen Degree Water (EDW). Among these processes, the amount of buoyancy loss at the ocean-atmosphere interface is still uncertain and needs to be accurately quantified. In November 2006, cruise 434 onboard R/V Oceanus traveled in the region of the separated Gulf Stream and its recirculation, where intense oceanic heat loss to the atmosphere in the winter is believed to trigger the formation of EDW. During this cruise, the surface mooring F that was anchored in the core of the Gulf Stream was replaced by a new one, as well as two subsurface moorings C and D located on the southeastern edge of the stream. Surface drifters, ARGO and bobbers RAFOS floats were deployed, CTD profiles and water samples were also carried out. This array of instruments will permit a characterization of EDW with high spatial and temporal resolutions and accurate in-situ measurements of air-sea fluxes in the EDW formation region. The present report documents this cruise, the methods and locations for the deployments of instruments and some evaluation of the measurements from these instruments.Funding was provided by the National Science Foundation under contract No. OCE04-2453

Extracellular BCL2 Proteins Are Danger-Associated Molecular Patterns That Reduce Tissue Damage in Murine Models of Ischemia-Reperfusion Injury

Ischemia-reperfusion (I/R) injury contributes to organ dysfunction in a variety of clinical disorders, including myocardial infarction, stroke, organ transplantation, and hemorrhagic shock. Recent investigations have demonstrated that apoptosis as an important mechanism of cell death leading to organ dysfunction following I/R. Intracellular danger-associated molecular patterns (DAMPs) released during cell death can activate cytoprotective responses by engaging receptors of the innate immune system.Ischemia was induced in the mouse hind limb by tourniquet or in the heart by coronary artery ligation. Reperfusion injury of skeletal or cardiac muscle was markedly reduced by intraperitoneal or subcutaneous injection of recombinant human (rh)BCL2 protein or rhBCL2-related protein A1 (BCL2A1) (50 ng/g) given prior to ischemia or at the time of reperfusion. The cytoprotective activity of extracellular rhBCL2 or rhBCL2A1 protein was mapped to the BH4 domain, as treatment with a mutant BCL2 protein lacking the BH4 domain was not protective, whereas peptides derived from the BH4 domain of BCL2 or the BH4-like domain of BCL2A1 were. Protection by extracellular rhBCL2 or rhBCL2A1 was associated with a reduction in apoptosis in skeletal and cardiac muscle following I/R, concomitant with increased expression of endogenous mouse BCL2 (mBCL2) protein. Notably, treatment with rhBCL2A1 protein did not protect mice deficient in toll-like receptor-2 (TLR2) or the adaptor protein, myeloid differentiation factor-88 (MyD88).Treatment with cytokine-like doses of rhBCL2 or rhBCL2A1 protein or BH4-domain peptides reduces apoptosis and tissue injury following I/R by a TLR2-MyD88-dependent mechanism. These findings establish a novel extracellular cytoprotective activity of BCL2 BH4-domain proteins as potent cytoprotective DAMPs

Outcomes From A Peer Tutor Model For Teaching Technology To Older Adults

A key component of social work ethics is social justice and equitable access to resources. Increasingly, this includes access to technology. This study addresses issues related to the \u27digital divide\u27 by testing a peer tutor model (Technology and Aging Project, TAP2) to teach adults aged 60 and older how to use information and communication technologies (ICTs) such as email, the internet, online chat rooms and discussion groups, internet-based support groups, and voice technology and webcams. Participants from the control group of a previous programme, TAP1 (N = 19) participated in a six-month computer training programme. Six participants who had successfully completed the TAP1 training were selected to be peer tutors. Data were collected from tutors and learners at baseline, three months, six months and nine months (three months after the end of training). The current study reports on learner outcomes only. Measures include computer, social support, and mental health-related outcomes. Learners reported a significant and consistent increase over time in their confidence completing certain computer-related tasks and their overall use of ICTs. Mental health and social support outcomes did not change. Overall, the peer tutor model appeared to be at least as effective as the previous staff-directed model

The Marine light - mixed layer experiment cruise and data report, R/V Endeavor : cruise EN-224, mooring deployment, 27 April-1 May 1991, cruise EN-227, mooring recovery, 5-23 September 1991

The Marine Light - Mixed Layer experiment took place in the sub-Arctic North Atlantic ocean, approximately 275 miles south of Reykjavik, Iceland. The field program included a central surface mooring to document the temporal evolution of physical, biological and optical properties. The surface mooring was deployed at approximately 59°N, 21°W on 29 April 1991 and recovered on 6 September 1991. The Upper Ocean Processes Group of the Woods Hole Oceanographic Institution was responsible for design, preparation, deployment, and recovery of the mooring. The Group's contrbution to the field measurements included four different types of sensors: a meteorological observation package on the surface buoy, a string of 15 temperature sensors along the mooring line, an acoustic Doppler current profiler, and four instruments for measuring mooring tension and accelerations. The observations obtained from the mooring are sufficient to describe the air-sea fluxes and the local physical response to surface forcing. The objective in the analysis phase will be to determine the factors controlling this physical response and to work towards an understanding of the links among physical, biological, and optical processes. This report describes the deployment and recovery of the mooring, the meteorological data, and the subsurface temperature and current data.Funding was provided by the Office of Naval Research under Contract N00014-89-J-1683