4 research outputs found
Improved Estimates of the Critical Point Constants for Large <i>n</i>‑Alkanes Using Gibbs Ensemble Monte Carlo Simulations
In
this work, we present improved estimates of the critical temperature
(<i>T</i><sub>c</sub>), critical density (ρ<sub>c</sub>), critical pressure (<i>P</i><sub>c</sub>), and critical
compressibility factor (<i>Z</i><sub>c</sub>) for <i>n</i>-alkanes with chain lengths as large as C<sub>48</sub>.
These are obtained for several different force field models with Gibbs
ensemble Monte Carlo simulations. We implement a recently proposed
data analysis method designed to reduce the uncertainty in <i>T</i><sub>c</sub>, ρ<sub>c</sub>, <i>P</i><sub>c</sub>, and <i>Z</i><sub>c</sub> when predicted with molecular
simulation. The results show a large reduction in the uncertainties
compared to the simulation literature with the greatest reduction
found for ρ<sub>c</sub>, <i>P</i><sub>c</sub>, and <i>Z</i><sub>c</sub>. Previously, even the most computationally
intensive molecular simulation studies have not been able to elucidate
the <i>n</i>-alkane <i>P</i><sub>c</sub> trend
with respect to larger carbon numbers. The results of this study are
significant because the uncertainty in <i>P</i><sub>c</sub> is small enough to discern between conflicting experimental data
sets and prediction models for large <i>n</i>-alkanes. Furthermore,
the results for <i>T</i><sub>c</sub> resolve a discrepancy
in the simulation literature with respect to the correct <i>T</i><sub>c</sub> trend for large <i>n</i>-alkanes. In addition,
the <i>Z</i><sub>c</sub> results are reliable enough to
determine the most accurate prediction trend for <i>Z</i><sub>c</sub>. Finally, finite-size effects are shown to not be significant
even for the relatively small system sizes required for efficient
simulation of longer chain lengths
New Vapor-Pressure Prediction with Improved Thermodynamic Consistency using the Riedel Equation
Vapor
pressure, heat of vaporization, liquid heat capacity, and
ideal-gas heat capacity for pure compounds between the triple point
and critical point are important properties for process design and
optimization. These thermophysical properties are related to each
other through temperature derivatives of thermodynamic relationships
stemming from a temperature-dependent vapor-pressure correlation.
The Riedel equation has been considered to be an excellent and simple
choice among vapor-pressure correlating equations [Velasco et al. J. Chem. Thermodyn. 2008, 40 (5), 789−797] but requires modification of the final coefficient to
provide thermodynamic consistency with thermal data [Hogge et al. Fluid Phase Equilib. 2016, 429, 149−165]. New predictive
correlations with final coefficients in integer steps from 1 to 6
have been created for compounds with limited or no vapor-pressure
data, based on the methodology used originally by Riedel [Chem. Ing. Tech. 1954, 26 (2), 83−89]. Liquid heat capacity was predicted using
these vapor-pressure correlations, and the best final coefficient
values were chosen based on the ability to simultaneously represent
vapor pressure and liquid heat capacity. This procedure improves the
fit to liquid heat-capacity data by 5–10% (average absolute
deviation), while maintaining the fit of vapor-pressure data similar
to those of other prediction methods. Additionally, low-temperature
vapor-pressure predictions were improved by relying on liquid heat-capacity
data
The Locational Impact of Site-Specific PEGylation: Streamlined Screening with Cell-Free Protein Expression and Coarse-Grain Simulation
Although
polyethylene glycol (PEG) is commonly used to improve
protein stability and therapeutic efficacy, the optimal location for
attaching PEG onto proteins is not well understood. Here, we present
a cell-free protein synthesis-based screening platform that facilitates
site-specific PEGylation and efficient evaluation of PEG attachment
efficiency, thermal stability, and activity for different variants
of PEGylated T4 lysozyme, including a di-PEGylated variant. We also
report developing a computationally efficient coarse-grain simulation
model as a potential tool to narrow experimental screening candidates.
We use this simulation method as a novel tool to evaluate the locational
impact of PEGylation. Using this screen, we also evaluated the predictive
impact of PEGylation site solvent accessibility, conjugation site
structure, PEG size, and double PEGylation. Our findings indicate
that PEGylation efficiency, protein stability, and protein activity
varied considerably with PEGylation site, variations that were not
well predicted by common PEGylation guidelines. Overall our results
suggest current guidelines are insufficiently predictive, highlighting
the need for experimental and simulation screening systems such as
the one presented here
Melting Point, Enthalpy of Fusion, and Heat Capacity Measurements of Several Polyfunctional, Industrially Important Compounds by Differential Scanning Calorimetry
The present paper
reports a differential scanning calorimetry (DSC)
study of 19 industrially important compounds that lacked key experimental
data in their respective two-phase vapor liquid regions. The compounds
are <i>o</i>-tolualdehyde (CAS 529-20-4), <i>m</i>-tolualdehyde (CAS 620-23-5), <i>p</i>-tolualdehyde (CAS
104-87-0), 3-methylbenzyl alcohol (CAS 587-03-1), <i>p</i>-toluic acid (CAS 99-94-5), 1-phenyl-1-propanol (CAS 93-54-9), 1-phenyl-2-propanol
(CAS 698-87-3), 2-phenyl-1-propanol (CAS 1123-85-9), 2-isopropylphenol
(CAS 88-69-7), 2,5-dimethylfuran (CAS 625-86-5), 5-methylfurfural
(CAS 620-02-0), phenyl acetate (CAS 122-79-2), ethyl 2-phenylacetate
(CAS 101-97-3), <i>n</i>-hexylcyclohexane (CAS 4292-75-5),
6-undecanone (CAS 927-49-1), 1<i>H</i>-perfluorooctane (CAS
335-65-9), 2,6-dimethoxyphenol (CAS 91-10-1), <i>trans</i>-isoeugenol (CAS 5932-68-3), and 1-propoxy-2-propanol (CAS 1569-01-3).
New experimental melting temperatures, enthalpies of fusion, glass
transition temperatures, and heat capacities of the liquid compounds
as a function of temperature are reported with a comparison to similar
compounds