27 research outputs found
Achieving Accurate Reduction Potential Predictions for Anthraquinones in Water and Aprotic Solvents: Effects of Inter- and Intramolecular H‑Bonding and Ion Pairing
In
this combined computational and experimental study, specific
chemical interactions affecting the prediction of one-electron and
two-electron reduction potentials for anthraquinone derivatives are
investigated. For 19 redox reactions in acidic aqueous solution, where
AQ is reduced to hydroanthraquinone, density functional theory (DFT)
with the polarizable continuum model (PCM) gives a mean absolute deviation
(MAD) of 0.037 V for 16 species. DFT(PCM), however, highly overestimates
three redox couples with a MAD of 0.194 V, which is almost 5 times
that of the remaining 16. These three molecules have ether groups
positioned for intramolecular hydrogen bonding that are not balanced
with the intermolecular H-bonding of the solvent. This imbalanced
description is corrected by quantum mechanics/molecular mechanics
(QM/MM) simulations, which include explicit water molecules. The best
theoretical estimations result in a good correlation with experiments, <i>V</i>(Theory) = 0.903<i>V</i>(Expt) + 0.007 with an <i>R</i><sup>2</sup> value of 0.835 and an MAD of 0.033 V. In addition
to the aqueous test set, 221 anthraquinone redox couples in aprotic
solvent were studied. Five anthraquinone derivatives spanning a range
of redox potentials were selected from this library, and their reduction
potentials were measured by cyclic voltammetry. DFT(PCM) calculations
predict the first reduction potential with high accuracy giving the
linear relation, <i>V</i>(Theory) = 0.960<i>V</i>(Expt) – 0.049 with an <i>R</i><sup>2</sup> value
of 0.937 and an MAD of 0.051 V. This approach, however, significantly
underestimates the second reduction potential, with an MAD of 0.329
V. It is shown herein that treatment of explicit ion-pair interactions
between the anthraquinone derivatives and the cation of the supporting
electrolyte is required for the accurate prediction of the second
reduction potential. After the correction, <i>V</i>(Theory)
= 1.045<i>V</i>(Expt) – 0.088 with an <i>R</i><sup>2</sup> value 0.910 and an MAD value reduced by more than half
to 0.145 V. Finally, molecular design principles are discussed that
go beyond simple electron-donating and electron-withdrawing effects
to lead to predictable and controllable reduction potentials
Synthesis and Enhanced Linear and Nonlinear Optical Properties of Chromophore–Au Metal Cluster Oligomers
Using nanoclusters
as building blocks for supracrystals can offer
unique optical and electronic properties of metal nanoclusters for
designing new materials. The advantage of building nanocluster crystals
through molecular linkers is that the linker can be used as a functional
group for the nanoclusters (e.g., dye–nanocluster systems).
In this study, we employed the ligand exchange reaction to synthesize
chromophore–Au<sub>25</sub> nanocluster oligomers and investigated
their linear and nonlinear optical properties. The chromophore–Au<sub>25</sub> nanocluster oligomers product mixture was separated into
four bands by polyacrylamide gel electrophoresis and characterized
by matrix-assisted laser desorption ionization mass spectrometry and
scanning transmission electron microscopy imaging. The linear optical
properties of the systems were investigated by steady state UV–vis
absorption and fluorescence spectroscopy. The chromophore–Au<sub>25</sub> nanocluster oligomers showed increased oscillator strength
and transition dipole moment compared to single Au<sub>25</sub> nanoclusters.
Energy transfer from the chromophore 4,4′-thiodibenzenethiol
(TBT) to the metal cluster was observed in the chromophore–Au<sub>25</sub> nanocluster dimer system. The excited state and fluorescence
dynamics were investigated by transient absorption spectroscopy, time-resolved
fluorescence upconversion, and time-correlated single photon counting.
The chromophore–Au<sub>25</sub> nanocluster oligomers have
a long-lived surface state due to the contribution of energy transfer
by two nanocluster cores. The two-photon absorption cross sections
of the chromophore–Au<sub>25</sub> nanocluster oligomers showed
an increasing enhancement trend with increasing oligomer length. An
enhancement factor of up to 68 times was found compared to single
Au<sub>25</sub> nanoclusters. Finally, we performed a structure–property
correlation analysis to explain the observed optical properties of
these systems
Density Functional Physicality in Electronic Coupling Estimation: Benchmarks and Error Analysis
Electronic
coupling estimates from constrained density functional
theory configuration interaction (CDFT-CI) depend critically on choice
of density functional. In this Letter, the orbital multielectron self-interaction
error (OMSIE), vertical electron affinity (VEA), and vertical ionization
potential (VIP) are shown to be the key indicators inherited from
the density functional that determine the accuracy of electronic coupling
estimates. An error metric η is derived to connect the three
properties, based on the linear proportionality between electronic
coupling and overlap integral, and the hypothesis that the slope of
this line is a function of VEA/VIP, η = (1/<i>N</i><sub>testset</sub>)Σ<sub><i>i</i></sub><sup>testset</sup>|−VE<sup>Ref</sup> × OMSIE + ΔVE – ΔVE × OMSIE|<sub><i>i</i></sub>. Based on η, BH&HLYP and LRC-ωPBEh
are suggested as the best functionals for electron and hole transfer,
respectively. Error metric η is therefore a useful predictor
of errors in CDFT-CI electronic coupling, showing that the physical
correctness of the density functional has a direct effect on the accuracy
of the electronic coupling
Organic Macromolecular High Dielectric Constant Materials: Synthesis, Characterization, and Applications
Hyperbranched and dendritic architectures have been targeted for various applications such as sensing, drug delivery, optical limiting, and light harvesting. One interesting development in this area has focused on utilizing the existence of long-range delocalization in hyperbranched structures to achieve high dielectric constants. In this Feature Article, we will review the creation and development of this concept, and we highlight our recent research progress in this aspect. In particular, we discuss (1) synthetic methods for a particular group of hyperbranched polymers; (2) detailed optical and electronic characterization of this group of hyperbranched polymers, revealing the design criteria for achieving a good combination of high dielectric constant and minimum loss in such materials; and (3) the importance and potential applications of these materials
New Approaches for Energy Storage with Hyperbranched Polymers
New
hyperbranched polymers have been investigated to provide new
structure–function relationships necessary for electrical and
optical applications. We can take advantage of long-range delocalization
in these structures for energy storage applications. This is accomplished
by obtaining high dielectric constants. In this Article, we demonstrate
the need for developing high dielectric hyperbranched polymers by
first investigating a ceramic/polymer hybrid system and then studying
the design criteria for these hyperbranched systems using detailed
optical and electronic characterization techniques. Provided in this
contribution are the energy storage results with ion-doped polyaniline
(PANI) polymers. An enhancement in the dielectric constant emerged
from strong long-range polaron delocalization and the mechanism of
a hyperelectronic polarization in these polymer systems. A copper
phthalocyanine (CuPc) core was selected to build novel hyperbranched
polymers to investigate their energy storage and optical properties.
We report the results of these hyperbranched polymers, which exhibited
high dielectric constants and low dielectric losses. Detailed structure–function
relationships were carried out to probe the polaron delocalization
mechanism. An outstanding result of a new hyperbranched polymer showed
the greatest energy storage capacity of 7.97 J cm<sup>–3</sup>. These results provide new insights into the design of new organic
macromolecules for energy storage
Two-Photon and Time-Resolved Fluorescence Spectroscopy as Probes for Structural Determination in Amyloid‑β Peptides and Aggregates
The development of new sensitive
methods for the detailed collection
of conformational and morphological information about amyloids is
crucial for the elucidation of critical questions regarding aggregation
processes in neurodegenerative diseases. The combined approach of
two-photon and time-resolved fluorescence spectroscopy described in
this report interrogates the early conformational dynamics seen in
soluble oligomers of amyloid-β(1–42). Concentration-dependent
aggregation studies using two-photon absorption show enhanced sensitivity
toward conformational changes taking place in the secondary structure
of the amyloid peptide as aggregation proceeds. Fluorescence lifetimes
and changes in anisotropy values indicate Förster-type energy
transfer occurring as a function of aggregation state. The sensitivity
of our two-photon methodology is compared to that of circular dichroism
(CD) spectroscopy, and the results indicate that the two-photon absorption
cross-section method exhibits superior sensitivity. A theoretical
model is developed that, together with electronic structure calculations,
explains the change in cross section as a function of aggregation
in terms of interacting transition dipoles for aggregates showing
stacked or parallel structures. This suggests that the two-photon
method provides a sensitive alternative to CD spectroscopy while avoiding
many of the inherent challenges particular to CD data collection.
The implication of this finding is significant, as it indicates that
a two-photon-based technique used in conjunction with time-resolved
fluorescence might be able to reveal answers to conformational questions
about amyloid-β(1–42) that are presently inaccessible
with other techniques
Evolution of the Dynamics of As-Deposited and Annealed Lead Halide Perovskites
The
rapid rise of organolead trihalide perovskites as solar photovoltaic
materials has been followed by promising developments in light-emitting
devices and lasers due to their unique and promising optical properties.
Evolution of the photophysical properties in as-deposited or annealed
CH<sub>3</sub>NH<sub>3</sub>PbBr<sub>3</sub> and CH<sub>3</sub>NH<sub>3</sub>PbI<sub>3</sub> perovskite films processed through the interdiffusion
method has been investigated. Absorption spectra showed broad band
edge saturation in the as-deposited films in contrast to sharp excitonic
absorption in the annealed films. Fluorescence emission of the perovskite
films showed strong dependence on the halogen type with a very high
quantum yield of ∼90% for the annealed CH<sub>3</sub>NH<sub>3</sub>PbBr<sub>3</sub> film. An explanation for this was provided
based on its crystallinity and quantum confinement of the excitons.
The emission showed weakly Stokes shifted bands. Time-resolved spectroscopic
measurements were carried out to probe the ultrafast dynamics for
the perovskites for the as-deposited or annealed films. We classified
the evolution in the absorption features in the excited state of CH<sub>3</sub>NH<sub>3</sub>PbBr<sub>3</sub> perovskite films for the first
time and compared them to CH<sub>3</sub>NH<sub>3</sub>PbI<sub>3</sub>. We suggest a bleach feature below 400 nm as the charge transfer
band, which results in the photoinduced absorption in the CH<sub>3</sub>NH<sub>3</sub>PbBr<sub>3</sub> perovskite film, a charge-separated
band gap state, and the existence of intermediate excited-state species
that regenerate the ground state
A New Design Strategy and Diagnostic to Tailor the DNA-Binding Mechanism of Small Organic Molecules and Drugs
The classical model for DNA groove
binding states that groove binding
molecules should adopt a crescent shape that closely matches the helical
groove of DNA. Here, we present a new design strategy that does not
obey this classical model. The DNA-binding mechanism of small organic
molecules was investigated by synthesizing and examining a series
of novel compounds that bind with DNA. This study has led to the emergence
of structure–property relationships for DNA-binding molecules
and/or drugs, which reveals that the structure can be designed to
either intercalate or groove bind with calf thymus dsDNA by modifying
the electron acceptor properties of the central heterocyclic core.
This suggests that the electron accepting abilities of the central
core play a key role in the DNA-binding mechanism. These small molecules
were characterized by steady-state and ultrafast nonlinear spectroscopies.
Bioimaging experiments were performed in live cells to evaluate cellular
uptake and localization of the novel small molecules. This report
paves a new route for the design and development of small organic
molecules, such as therapeutics, targeted at DNA as their performance
and specificity is dependent on the DNA-binding mechanism
Effect of Acceptor Strength on Optical and Electronic Properties in Conjugated Polymers for Solar Applications
Four new low-bandgap electron-accepting
polymerspoly(4,10-bis(2-butyloctyl)-2-(2-(2-ethylhexyl)-1,1-dioxido-3-oxo-2,3-dihydrothieno[3,4-<i>d</i>]isothiazol-4-yl)thieno[2′,3′:5,6]pyrido[3,4-<i>g</i>]thieno[3,2-<i>c</i>]isoquinoline-5,11(4<i>H</i>,10<i>H</i>-dione) (PNSW); poly(4,10-bis(2-butyloctyl)-2-(5-(2-ethylhexyl)-4,6-dioxo-5,6-dihydro-4<i>H</i>-thieno[3,4-<i>c</i>]pyrrol-1-yl)thieno[2′,3′:5,6]pyrido[3,4-<i>g</i>]thieno[3,2-<i>c</i>]isoquinoline-5,11(4<i>H</i>,10<i>H</i>)-dione) (PNTPD); poly(5-(4,10-bis(2-butyloctyl)-5,11-dioxo-4,5,10,11-tetrahydrothieno[2′,3′:5,6]pyrido[3,4-<i>g</i>]thieno[3,2-<i>c</i>]isoquinolin-2-yl)-2,9-bis(2-decyldodecyl)anthra[2,1,9-<i>def</i>:6,5,10-<i>d′e′f′</i>]diisoquinoline-1,3,8,10(2<i>H</i>,9<i>H</i>)-tetraone) (PNPDI); and poly(9,9-bis(2-butyloctyl)-9<i>H</i>-fluorene-bis((1,10:5,6)2-(5,6-dihydro-4<i>H</i>-cyclopenta[<i>b</i>]thiophene-4-ylidene)malonitrile)-2-(2,3-dihydrothieno[3,4-<i>b</i>][1,4]dioxine)) (PECN)containing thieno[2′,3′:5′,6′]pyrido[3,4-<i>g</i>]thieno[3,2-<i>c</i>]isoquinoline-5,11(4<i>H</i>,10<i>H</i>)-dione and fluorenedicyclopentathiophene
dimalononitrile, were investigated to probe their structure–function
relationships for solar cell applications. PTB7 was also investigated
for comparison with the new low-bandgap polymers. The steady-state,
ultrafast dynamics and nonlinear optical properties of all the organic
polymers were probed. All the polymers showed broad absorption in
the visible region, with the absorption of PNPDI and PECN extending
into the near-IR region. The polymers had HOMO levels ranging from
−5.73 to −5.15 eV and low bandgaps of 1.47–2.45
eV. Fluorescence upconversion studies on the polymers showed long
lifetimes of 1.6 and 2.4 ns for PNSW and PNTPD, respectively, while
PNPDI and PECN showed very fast decays within 353 and 110 fs. PECN
exhibited a very high two-photon absorption cross section. The electronic
structure calculations of the repeating units of the polymers indicated
the localization of the molecular orbitals in different co-monomers.
As the difference between the electron affinities of the co-monomers
in the repeating units decreases, the highest occupied and lowest
unoccupied molecular orbitals become more distributed. All the measurements
suggest that a large difference in the electron affinities of the
co-monomers of the polymers contributes to the improvement of the
photophysical properties necessary for highly efficient solar cell
performance. PECN exhibited excellent photophysical properties, which
makes it to be a good candidate for solar cell device applications
Beads on a Chain (BoC) Phenylsilsesquioxane (SQ) Polymers via F<sup>–</sup> Catalyzed Rearrangements and ADMET or Reverse Heck Cross-coupling Reactions: Through Chain, Extended Conjugation in 3‑D with Potential for Dendronization
In this paper, we assess the utility
of complementary routes to
silsesquioxane based compounds using F<sup>–</sup> catalyzed
coupling to synthesize [vinylSiO<sub>1.5</sub>]<sub><i>x</i></sub>PhSiO<sub>1.5</sub>]<sub>10‑<i>x</i>/12‑<i>x</i></sub> mixtures followed by copolymerization with divinylbenzene
(via ADMET), or using reverse Heck coupling with 1,4-dibromobenzene
and 4,4′-dibromo-stilbene to prepare lightly branched, nonlinear
BOC systems. In another paper, we describe the use of Heck and Suzuki
coupling to synthesize model conjugated <i>p</i>-R-stilbeneSQ
BOCs starting from [<i>p</i>-IPh<sub>8</sub>SiO<sub>1.5</sub>]<sub>8</sub> and coupling with divinylbenzene (DVB) and 1,4-diethynylbenzene
(DEB) finding extended 3-D conjugation in the DEB polymers. We find
that the reverse Heck coupling (where the linker contains the bromo
moieties) works best for these systems giving BoC oligomers with <i>M</i><sub>n</sub> of ∼6 kDa, in which extended excited
state conjugation is observed for 1,4-dibromobenzene linked systems
through ∼50+ nm red shifts in the emission spectra compared
with DVB linked systems and model compounds. We compare and contrast
the photophysical properties of the two sets of BOCs and the system
where the conjugation length of the linker changes from divinylbenzene
to divinylstilbene. We find that for a linker with a longer conjugation
length, a red-shifted absorption and emission is observed; however,
the difference in emission is much larger for the 1,4-dibromobenzene-linked
system as compared to the model compounds, suggesting that a more
rigid linker contributes to better orbital overlap with the cage and/or
phenyl groups, increasing excited state conjugation interactions