REACCELERATION OF ION BEAMS FOR PARTICLE THERAPY

Abstract At the Heidelberg Ion-Beam Therapy Centre (HIT) more than 2000 cancer patients have been treated with ions using the raster-scanning method since 2009. The synchrotron provides pencil beams in therapy quality for more than 250 energy steps for each ion species allowing to vary the penetration depth and thus to irradiate the tumour slice-by-slice. So far, changing the beam energy necessitates a new synchrotron cycle, including all phases without beam extraction. As the number of ions that can be accelerated in the synchrotron usually exceeds the required number of ions for one energy slice, the duty cycle could be significantly reduced by reaccelerating or decelerating the remaining ions to the adjacent energy level. By alternating acceleration and extraction phases several slices could be irradiated with only short interruptions. This leads to a better duty cycle and a larger number of patients that can be treated in the same time. Therefore the behaviour of a reaccelerated but transversally blown up beam -due to the use of RF-knockout extraction -must be investigated in detail, beam losses have to be minimised. To estimate the potential benefit of such an operation mode, treatment time has been simulated and compared to the time achieved in the past. A reduction of more than 50 % is possible

Evolution of Stress-Regulated Gene Expression in Duplicate Genes of Arabidopsis thaliana

Due to the selection pressure imposed by highly variable environmental conditions, stress sensing and regulatory response mechanisms in plants are expected to evolve rapidly. One potential source of innovation in plant stress response mechanisms is gene duplication. In this study, we examined the evolution of stress-regulated gene expression among duplicated genes in the model plant Arabidopsis thaliana. Key to this analysis was reconstructing the putative ancestral stress regulation pattern. By comparing the expression patterns of duplicated genes with the patterns of their ancestors, duplicated genes likely lost and gained stress responses at a rapid rate initially, but the rate is close to zero when the synonymous substitution rate (a proxy for time) is >∼0.8. When considering duplicated gene pairs, we found that partitioning of putative ancestral stress responses occurred more frequently compared to cases of parallel retention and loss. Furthermore, the pattern of stress response partitioning was extremely asymmetric. An analysis of putative cis-acting DNA regulatory elements in the promoters of the duplicated stress-regulated genes indicated that the asymmetric partitioning of ancestral stress responses are likely due, at least in part, to differential loss of DNA regulatory elements; the duplicated genes losing most of their stress responses were those that had lost more of the putative cis-acting elements. Finally, duplicate genes that lost most or all of the ancestral responses are more likely to have gained responses to other stresses. Therefore, the retention of duplicates that inherit few or no functions seems to be coupled to neofunctionalization. Taken together, our findings provide new insight into the patterns of evolutionary changes in gene stress responses after duplication and lay the foundation for testing the adaptive significance of stress regulatory changes under highly variable biotic and abiotic environments

OPERATION OF THE LINAC AND THE LINAC RF SYSTEM FOR THE ION-BEAM THERAPY CENTER HEIDELBERG

Abstract The Heidelberg Ion Therapy Center HIT is in clinical operation since 2009. It is the first dedicated European particle accelerator for medical treatment. Its central location on the campus of the Heidelberg University Hospital fits perfectly in the clinical everyday life. The accelerator complex consists of a linear accelerator and a synchrotron and is designed for protons and carbon ions, but can also provide helium and oxygen ions. The LINAC, build in 2006, operates since 5 years in a 24/7 schema which leads to 60000 operating hours up to now. The performance with an availability of better than 99% is much higher than expected and is caused by a solid design and a well planned and foresighted maintenance. Unavoidable failures during operation can be solved very fast with the on site experts for each section. The combination of personnel, spare parts and permanent ongoing developments is very successful. An upgrade program for parts of the LINAC and also for the RF system is in planning to keep the up-time high and to improve the performance for further needs