Genetic variation of 12 rice cultivars grown in Brunei Darussalam and assessment of their tolerance to saline environment

Genetic variations of 12 different rice cultivars in Brunei Darussalam were studied using 15 different SSR markers and their salinity tolerance mechanism was also assessed. Eight SSR markers, RM 151, 187, 206, 226, 276, 310, 320 and 334, showed polymorphic alleles while the other seven were monomorphic. A total of 158 alleles were amplified for all these rice cultivars using 15 SSR markers, with an average of 10.53. The allele frequencies per locus or marker range from 0 in RM 307 to five alleles in RM 226. PIC values varied from 0.00 to 0.7521. Similarity distance varied from 0.00 to 1.00. Dendrogram showed three distinct clusters, where both Kuaci and Sp1 significantly diverted from the other ten rice cultivars. Bandul berminyak was the most tolerant to salinity. Quantum yield for B. berminyak were unaffected and it showed the least reduction in growth parameters studied when expose to salinity stress. From both salinity tolerance and genetic variation investigations for these 12 cultivars, it may probably be better to intercross between Arat (moderately tolerant) and Sp1 (susceptible) as both are from different clusters, showed low genetic similarity with 0.33 and different salinity tolerance level. Key words: Genetic variability, rice cultivars, SSR markers, salinity.Abbreviation: RFLP, Restriction fragment length polymorphism; RAPD, random amplified polymorphic DNA; AFLP, amplified fragment length polymorphism; ISSR, inter-simple sequence repeat; SSR, single sequence repeats; PIC, polymorphism information content; RM, rice marker

Interactions between hemiparasitic plants and their hosts

Hemiparasitic plants display a unique strategy of resource acquisition combining parasitism of other species and own photosynthetic activity. Despite the active photoassimilation and green habit, they acquire substantial amount of carbon from their hosts. The organic carbon transfer has a crucial influence on the nature of the interaction between hemiparasites and their hosts which can oscillate between parasitism and competition for light. In this minireview, we summarize methodical approaches and results of various studies dealing with carbon budget of hemiparasites and the ecological implications of carbon heterotrophy in hemiparasites

Phenotypic and genotypic characterisation of root nodule bacteria nodulating Millettia pinnata (L.) Panigrahi, a biodiesel tree

Aims. Milletia pinnata is a leguminous tropical tree that produces seed oil suitable for biodiesel and is targeted to be planted on marginal land associated with nitrogen poor soil. This study aimed to identify effective rhizobia species for M. pinnata. Methods. Soil samples were collected from M. pinnata grown in Kununurra, Australia. Rhizobia were trapped, characterised and sequenced for 16S rRNA, atpD, dnaK and recA genes. Results. Forty isolates tolerated pH 7 – 9, temperatures 29 – 37 °C, salinity below 1 % NaCl, and had optimal growth on mannitol, arabinose or glutamate as a single carbon source, a few grew on sucrose and none grew on lactose. Inoculation of isolates increased shoot dry weight of M. pinnata’s seedlings in nitrogen minus media. Slow-growing isolates were closely related to Bradyrhizobium yuanmingense, Bradyrhizobium sp. DOA10, Bradyrhizobium sp. ORS305 and B. liaoningense LMG 18230T. The fast-growing isolates related to Rhizobium sp. 8211, R. miluonense CCBAU 41251T, R miluonense CC-B-L1, Rhizobium sp. CCBAU 51330 and Rhizobium sp. 43015. Conclusions. Millettia pinnata was effectively nodulated by slow-growing isolates related to Bradyrhizobium yuanmingense, Bradyrhizobium sp. DOA10 Bradyrhizobium sp. ORS305, B. liaoningense LMG 18230T and fast-growing isolates related Rhizobium sp. 8211, R. miluonense, Rhizobium sp. CCBAU 51330 and Rhizobium sp. 43015