In vitro effects of regulators on growth and morphogenesis of Ocimum basilicum L. ‘Alfavaca Green’ stem apexes

Large-scale cultivation of contamination free plants requires a good standardization protocol and production methods. Basil is widely used for cosmetics, food and pharmaceutical industries as it is rich in many bioactive compounds. This present study aimed to evaluate the growth and in vitro anatomical aspects of apical buds of basil grown under different concentrations rowth regulators like: NAA (Naphthalenoacetic Acid), BAP (6-benzylaminopurine), and KIN (Kinetin). The in vitro establishment was evaluated every 20 days to calculate the, the percentage of plants with calluses, appearance of the roots, any abnormal seedlings, any oxidized seedlings, and the number of sprouts per plant. Growth, physiological, and morpho-anatomical evaluations were performed at 80 days. Basal callogenesis was observed when cytokinin’s and auxins are used in combination. Auxin treatments caused hyperhydricity in the stems and leaves. Medium A2 (0.05 mg L -1 of NAA and 0.1 mg L -1 of BAP), and A3 (0.05 mg L -1 of NAA and 0.1 mg L -1 of KIN) resulted in the best development of basil plants, cultivar ‘Alfavaca Green’. The A2 produced plants with greater numbers of leaves, an average bud length of 59.81 mm, and the best root properties. A2 and A1 have a higher percentage of hyperhydricity (83 and 67%). The A3 resulted in an acceptable number of leaves (range: 21–39), and this treatment produced the best shoot properties as well as fewer plants with hyperhydricity. In addition, the A3 treatment produced plants with a shoot length, high shoot fresh and dry mass (2.82 and 0.23 g), high chlorophyll index and leaf anatomy that was similar to the control. Excluding the control, the other treatments presented more than 90% of the explants with calluses in their bases

Localization and genomic structure of human deoxyhypusine synthase gene on chromosome 19p13.2-distal 19p13.1

The amino acid hypusine is formed post-translationally in a single cellular protein, the eukaryotic translation initiation factor 5A, by two enzymes, namely deoxyhypusine synthase and deoxyhypusine hydroxylase. Hypusine is found in all eukaryotes and in some archaebacteria, but not in eubacteria. The deoxyhypusine synthase cDNA was cloned and mapped by fluorescence in situ hybridization on chromosome 19p13.11-p13.12. Rare cDNAs containing internal deletions were also found. We localized the deoxyhypusine synthase gene on a high resolution cosmid/BAC contig map of chromosome 19 to a region in 19p13.2-distal 19p13.1 between MANB and JUNB. Analysis of the genomic exon/intron structure of the gene coding region showed that it consists of nine exons and spans a length of 6.6kb. From observation of the genomic structure, it seems likely that the internally deleted forms of mature RNA are the result of alternative splicing, rather than of artifacts

Copper modulates the biochemical and enzymatic activity and growth of tomato cultivars grown in vitro

Received: August 25th, 2020 ; Accepted: December 17th, 2020 ; Published: February 09th, 2021 ; Correspondence: [email protected] (Cu) is a micronutrient that is neglected for tomato growth. This study sought to identify the effects of exposure to Cu on the growth and biochemical activity of two tomato cultivars. Tomato seeds of ‘Carolina’ and ‘Cereja’ cultivars were disinfected and inoculated in MS medium plus copper sulfate concentrations (CuSO4) (default MS, 25, 50, and 100 µm) and had their growth monitored for 30 days. It was estimated that the growth and biomass accumulation of tomato plants ‘Carolina’ and ‘Cereja’, both from the aerial part and the roots, were benefited by 25 e 50 µm of CuSO4. However, it was observed that these concentrations were inefficient in controlling hyperhydricity and leaf deformation. There was a reduction of these phenomena in the treatment with 100 µm, in both cultivars. Tomato of ‘Carolina’ cultivar subjected to 100 µm showed an increase in anthocyanins and superoxide dismutase (SOD) activity in the root system. There was a reduction of catalase (CAT) activity in shoots exposed to Cu. ‘Cereja’ tomatoes subjected to 100 µm showed an increase in CAT and SOD activity in shoots and roots, respectively. It was concluded that the ‘Carolina’ and ‘Cereja’ tomatoes have their growth impaired when exposed to 100 µm CuSO4. Concentrations higher than 50 µm of CuSO4 cause an increase in the antioxidant activity in the shoot of tomato plants from the ‘Carolina’ cultivar. Concentrations higher than 50 µm CuSO4 increase SOD activity in the root system of tomato plants from the ‘Cereja’ cultivar

A fine physical map of the CACNA1A gene region on 19p13.1-p13.2 chromosome

The P/Q-type Ca(2+) channel alpha(1A) subunit gene (CACNA1A) was cloned on the short arm of chromosome 19 between the markers D19S221 and D19S179 and found to be responsible for Episodic Ataxia type 2, Familial Hemiplegic Migraine and Spinocerebellar Ataxia type 6. This region was physically mapped by 11 cosmid contigs spanning about 1. 4Mb, corresponding to less than 70% of the whole region. The cosmid contig used to characterize the CACNA1A gene accounted only for the coding region of the gene lacking, therefore, the promoter and possible regulation regions. The present study improves the physical map around and within the CACNA1A by giving a complete cosmid or BAC contig coverage of the D19S221-D19S179 interval. A number of new STSs, whether polymorphic or not, were characterized and physically mapped within this region. Four ESTs were also assigned to cosmids belonging to specific contigs

Forefront users\u2019 experience evaluation by employing together virtual reality and electroencephalography: A case study on cognitive effects of scents

Scents have the ability to affect peoples\u2019 mental states and task performance with to different extents. It has been widely demonstrated that the lemon scent, included in most all-purpose cleaners, elicits stimulation and activation, while the lavender scent elicits relaxation and sedative effects. The present study aimed at investigating and fostering a novel approach to evaluate users\u2019 experience with respect to scents\u2019 effects through the joint employment of Virtual Reality and users\u2019 neurophysiological monitoring, in particular Electroencephalography. In particular, this study, involving 42 participants, aimed to compare the effects of lemon and lavender scents on the deployment of cognitive resources during a daily life experience consisting in a train journey carried out in virtual reality. Our findings showed a significant higher request of cognitive resources during the processing of an informative message for subjects exposed to the lavender scent with respect to the lemon exposure. No differences were found between lemon and lavender conditions on the self\u2010reported items of pleasantness and involvement; as this study demonstrated, the employment of the lavender scent preserves the quality of the customer experience to the same extent as the more widely used lemon scent

Nitrate: its role on ruminal fermentation of beef cattle under intensified grazing system.

Rumen fermentation it is one of the contributors to the greenhouse gases emission (GHG) that causes global warming, and due to that reason livestock production is scrutinized and questioned all around the world on how GHG emissions from this subsector can be mitigated. A range of techniques have been studied by animal scientist, at nutritional level, to mitigate methane emission. Nitrate is of them, and it has a double important role on rumen fermentation, acting as a source of non-protein nitrogen, and as an electron sink path that allows the redirection of hydrogen to nitrate reduction, instead of being used in the methanogenesis process, and thus reducing methane emission. The partial results here presented shows that nitrate does not affect forage, supplement, and total dry mater intake, and neither short chain fatty acids production, however, methane emission (g.kg.day-1) and CO2eq emissions per kg. head-1d-1were reduced when nitrate was added in the diet. Thus, nitrate has the ability in changing rumen fermentation, which besides acting as source of non-protein nitrogen, also mitigate anthropic GHG emissions from enteric fermentation

Emission of greenhouse gases from soils under pastures submitted to diferent grazing managements and nitrogen fertilization rates, and intercropping with macrotyloma.

In Brazil, agriculture contributes to the emission of greenhouse gases, but has great power to sequester carbon (C) in the soil. The objective of this research was to quantify the C stock in the soil due to land use change (LUC) from forest (Atlantic Forest biome) to Urochloa brizantha pasture, obtaining LUC factors; as well as determining C sequestration rates resultant of the adoption of better pasture management practices. The soil C stocks with the change of land use from forest to pasture was investigated in two locations, one with Dystrophic Red Oxisol and Dystrophic Red Argisol, and the other with Dark Red Oxisol, in the cities of Nova Odessa and Pirassununga, both in the State of São Paulo. Soil C stocks were obtained from soil sampling in pits with an auger, in different layers, down to 100 cm deep. The LUC factor was calculated from the ratio between the C stock in the forest soil and the C stock in the soil under pasture, for each location and soil type. The intensification of pasture management was studied in Pirassununga, resultant ofnitrogen fertilization and deferred or rotated grazing, while in Nova Odessa nitrogen fertilization and intercropping between U. brizantha and Macrotyloma axillare were tested. Soil sampling to obtain initial C stocks and after two years of implementing the new management was carried out in a similar way to that mentioned for LUC, but only considering the soil downto 30 cm deep. The factors for LUC varied between 0.76 and 0.98, demonstrating that inadequate management can affect the C stock in the soil in relation to the forest (standard IPCC value of 1), but that these factors increased when an appropriate management was applied, varying between 1.04 and 1.18, when compared to the IPCC factor standard value of 1.17. Furthermore, management practices resulted in C sequestration rates ranging between 1.2 and 4.4 t C ha-1 year-1, relatively high values that demonstrate the high potential of soils under pasture for C sequestration

A novel approach to investigate tissue-specific trinucleotide repeat instability

Abstract Background In Huntington's disease (HD), an expanded CAG repeat produces characteristic striatal neurodegeneration. Interestingly, the HD CAG repeat, whose length determines age at onset, undergoes tissue-specific somatic instability, predominant in the striatum, suggesting that tissue-specific CAG length changes could modify the disease process. Therefore, understanding the mechanisms underlying the tissue specificity of somatic instability may provide novel routes to therapies. However progress in this area has been hampered by the lack of sensitive high-throughput instability quantification methods and global approaches to identify the underlying factors. Results Here we describe a novel approach to gain insight into the factors responsible for the tissue specificity of somatic instability. Using accurate genetic knock-in mouse models of HD, we developed a reliable, high-throughput method to quantify tissue HD CAG repeat instability and integrated this with genome-wide bioinformatic approaches. Using tissue instability quantified in 16 tissues as a phenotype and tissue microarray gene expression as a predictor, we built a mathematical model and identified a gene expression signature that accurately predicted tissue instability. Using the predictive ability of this signature we found that somatic instability was not a consequence of pathogenesis. In support of this, genetic crosses with models of accelerated neuropathology failed to induce somatic instability. In addition, we searched for genes and pathways that correlated with tissue instability. We found that expression levels of DNA repair genes did not explain the tissue specificity of somatic instability. Instead, our data implicate other pathways, particularly cell cycle, metabolism and neurotransmitter pathways, acting in combination to generate tissue-specific patterns of instability. Conclusion Our study clearly demonstrates that multiple tissue factors reflect the level of somatic instability in different tissues. In addition, our quantitative, genome-wide approach is readily applicable to high-throughput assays and opens the door to widespread applications with the potential to accelerate the discovery of drugs that alter tissue instability

The Histone Demethylase Jarid1b (Kdm5b) Is a Novel Component of the Rb Pathway and Associates with E2f-Target Genes in MEFs during Senescence

Senescence is a robust cell cycle arrest controlled by the p53 and Rb pathways that acts as an important barrier to tumorigenesis. Senescence is associated with profound alterations in gene expression, including stable suppression of E2f-target genes by heterochromatin formation. Some of these changes in chromatin composition are orchestrated by Rb. In complex with E2f, Rb recruits chromatin modifying enzymes to E2f target genes, leading to their transcriptional repression. To identify novel chromatin remodeling enzymes that specifically function in the Rb pathway, we used a functional genetic screening model for bypass of senescence in murine cells. We identified the H3K4-demethylase Jarid1b as novel component of the Rb pathway in this screening model. We find that depletion of Jarid1b phenocopies knockdown of Rb1 and that Jarid1b associates with E2f-target genes during cellular senescence. These results suggest a role for Jarid1b in Rb-mediated repression of cell cycle genes during senescence