2 research outputs found

    NH<sub>3</sub> as a Strong Hā€‘Bond Donor in Singly- and Doubly-Bridged Ammonia Solvent Clusters: 2ā€‘PyridoneĀ·(NH<sub>3</sub>)<sub><i>n</i></sub>, <i>n</i> = 1ā€“3

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    Mass- and isomer-selected infrared spectra of 2-pyridoneĀ·(NH<sub>3</sub>)<sub><i>n</i></sub> clusters with <i>n</i> = 1ā€“3 were measured in the NH and CH stretch fundamental region (2400ā€“3700 cm<sup>ā€“1</sup>) using infrared (IR) laser depletion spectroscopy combined with resonant two-photon ionization UV laser detection. The IR depletion spectra reveal three different H-bonding topologies of these clusters: The <i>n</i> = 1 and 2 clusters form ammonia bridges stretching from the Nā€“H to the Cī—»O group of the <i>cis</i>-amide function of 2-pyridone (2PY), giving rise to intense and strongly red-shifted (2PY)Ā­NH and ammonia NH stretch bands. For <i>n</i> = 3, two isomers (3X and 3Y) are observed in the IR spectra: The spectrum of 3X is compatible with an ammonia-bridge structure like <i>n</i> = 2, with the third NH<sub>3</sub> accepting an H-bond from C<sup>6</sup>ā€“H of 2PY. The IR spectrum of 3Y exhibits a broad IR band in the 2500ā€“3000 cm<sup>ā€“1</sup> range and is characteristic of a bifurcated double-bridged structure in which the first NH3 accepts an H-bond from the (2PY)Ā­NH and donates two H-bonds to the other two ammonias, both of which donate to the Cī—»O group of 2PY. This double-donor/double-bridge H-bonding pattern increases the acceptor strength of the first ammonia and dramatically lowers the (2PY)Ā­NH stretching frequency to āˆ¼2700 cm<sup>ā€“1</sup>. For all clusters the ammonia 2Ī½<sub>4</sub> HNH bend overtones in the 3180ā€“3320 cm<sup>ā€“1</sup> region gain intensity by anharmonic coupling (Fermi resonance) to the hydrogen-bonded ammonia NH stretches, which are red-shifted into the 3250ā€“3350 cm<sup>ā€“1</sup> region. The experimental results are supported by optimized structures, vibrational frequencies, and IR intensities calculated using density-functional theory with the B3LYP and PW91 functionals, as well as with the more recent functionals B97-D and M06-2X, which are designed to include long-range dispersive interactions

    Gas-Phase Cytosine and Cytosineā€‘N<sub>1</sub>ā€‘Derivatives Have 0.1ā€“1 ns Lifetimes Near the S<sub>1</sub> State Minimum

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    Ultraviolet radiative damage to DNA is inefficient because of the ultrafast S<sub>1</sub> ā‡ S<sub>0</sub> internal conversion of its nucleobases. Using picosecond pumpā€“ionization delay measurements, we find that the S<sub>1</sub>(<sup>1</sup><i>Ļ€Ļ€</i>*) state vibrationless lifetime of gas-phase keto-amino cytosine (Cyt) is Ļ„ = 730 ps or āˆ¼700 times longer than that measured by femtosecond pumpā€“probe ionization at higher vibrational excess energy, <i>E</i><sub>exc</sub>. N<sub>1</sub>-Alkylation increases the S<sub>1</sub> lifetime up to Ļ„ = 1030 ps for N<sub>1</sub>-ethyl-Cyt but decreases it to 100 ps for N<sub>1</sub>-isopropyl-Cyt. Increasing the vibrational energy to <i>E</i><sub>exc</sub> = 300ā€“550 cm<sup>ā€“1</sup> decreases the lifetimes to 20ā€“30 ps. The nonradiative dynamics of S<sub>1</sub> cytosine is not solely a property of the amino-pyrimidinone chromophore but is strongly influenced by the N<sub>1</sub>-substituent. Correlated excited-state calculations predict that the gap between the S<sub>2</sub>(<sup>1</sup><i>n</i><sub>O</sub>Ļ€*) and S<sub>1</sub>(<sup>1</sup><i>Ļ€Ļ€</i>*) states decreases along the series of N<sub>1</sub>-derivatives, thereby influencing the S<sub>1</sub> state lifetime
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