SeaWiFS technical report series. Volume 6: SeaWiFS technical report series cumulative index: Volumes 1-5

The Sea-viewing Wide Field-of-view Sensor (SeaWiFS) is the follow-on ocean color instrument to the Coastal Zone Color Scanner (CZCS), which ceased operations in 1986, after an eight year mission. SeaWiFS is expected to be launched in August 1993, on the Sea Star satellite, being built by Orbital Sciences Corporation (OSC). The SeaWiFS Project at the NASA/Goddard Space Flight Center (GSFC) has undertaken the responsibility of documenting all aspects of this mission, which is critical to the ocean color and marine science communities. This documentation, entitled the SeaWiFS Technical Report Series, is in the form of NASA Technical Memoranda Number 104566. All reports published are volumes within the series. This volume serves as a reference, or guidebook, to the previous five volumes and consists of four main sections including an index to key words and phrases, a list of all references cited, and lists of acronyms and symbols used. It is our intention to publish a summary index of this type after every five volumes in the series. This will cover the topics published in all previous editions of the indices, that is, each new index will include all of the information contained in the preceding indices

SeaWiFS Technical Report Series. Volume 7: Cloud screening for polar orbiting visible and infrared (IR) satellite sensors

Methods for detecting and screening cloud contamination from satellite derived visible and infrared data are reviewed in this document. The methods are applicable to past, present, and future polar orbiting satellite radiometers. Such instruments include the Coastal Zone Color Scanner (CZCS), operational from 1978 through 1986; the Advanced Very High Resolution Radiometer (AVHRR); the Sea-viewing Wide Field-of-view Sensor (SeaWiFS), scheduled for launch in August 1993; and the Moderate Resolution Imaging Spectrometer (IMODIS). Constant threshold methods are the least demanding computationally, and often provide adequate results. An improvement to these methods are the least demanding computationally, and often provide adequate results. An improvement to these methods is to determine the thresholds dynamically by adjusting them according to the areal and temporal distributions of the surrounding pixels. Spatial coherence methods set thresholds based on the expected spatial variability of the data. Other statistically derived methods and various combinations of basic methods are also reviewed. The complexity of the methods is ultimately limited by the computing resources. Finally, some criteria for evaluating cloud screening methods are discussed

SeaWiFS Technical Report Series

The Sea-viewing Wide Field-of-view Sensor (SeaWiFS) is the follow-on ocean color instrument to the Coastal Zone Color Scanner (CZCS), which ceased operations in 1986, after an eight-year mission. SeaWiFS was launched on 1 August 1997, on the SeaStar satellite, built by Orbital Sciences Corporation (OSC). The SeaWiFS Project at the National Aeronautics and Space Administration (NASA) Goddard Space Flight Center (GSFC), undertook the responsibility of documenting all aspects of this mission, which is critical to the ocean color and marine science communities. This documentation, entitled the SeaWiFS Technical Report Series, is in the form of NASA Technical Memorandum Number 104566 and 1998-104566. All reports published are volumes within the series. This particular volume, which is the last of the so-called Prelaunch Series serves as a reference, or guidebook, to the previous 42 volumes and consists of 6 sections including: an addenda, an errata, an index to key words and phrases, lists of acronyms and symbols used, and a list of all references cited. The editors have published a cumulative index of this type after every five volumes. Each index covers the reference topics published in all previous editions, that is, each new index includes all of the information contained in the preceding indexes with the exception of any addenda

SeaWiFS technical report series. Volume 12, SeaWiFS technical report series cumulative index: Volumes 1-11

The Sea-viewing Wide Field-of-view Sensor (SeaWiFS) is the follow-on ocean color instrument to the Coastal Zone Color Scanner (CZCS), which ceased operations in 1986, after an 8-year mission. SeaWiFS is expected to be launched in 1994, on the SeaStar satellite, being built by Orbital Sciences Corporation (OSC). The SeaWiFS Project at the National Aeronautics and Space Administration's (NASA) Goddard Space Flight Center (GSFC) has undertaken the responsibility of documenting all aspects of this mission, which is critical to the ocean color and marine science communities. This documentation, entitled the SeaWiFS Technical Report Series, is in the form of NASA Technical Memorandum Number 104566. All reports published are volumes within the series. This particular volume serves as a reference, or guidebook, to the previous 11 volumes and consists of 6 sections including: an errata, an addendum (a summary of the SeaWiFS Working Group Bio-optical Algorithm and Protocols Subgroups Workshops), an index to keywords and phrases, a list of all references cited, and lists of acronyms and symbols used. It is the editors' intention to publish a cumulative index of this type after every five volumes in the series. This will cover the topics published in all previous editions of the indices, that is, each new index will include all of the information contained in the preceding indices

SeaWiFS technical report series. Volume 5: Ocean optics protocols for SeaWiFS validation

Protocols are presented for measuring optical properties, and other environmental variables, to validate the radiometric performance of the Sea-viewing Wide Field-of-view Sensor (SeaWiFS), and to develop and validate bio-optical algorithms for use with SeaWiFS data. The protocols are intended to establish foundations for a measurement strategy to verify the challenging SeaWiFS accuracy goals of 5 percent in water-leaving radiances and 35 percent in chlorophyll alpha concentration. The protocols first specify the variables which must be measured, and briefly review rationale. Subsequent chapters cover detailed protocols for instrument performance specifications, characterizing and calibration instruments, methods of making measurements in the field, and methods of data analysis. These protocols were developed at a workshop sponsored by the SeaWiFS Project Office (SPO) and held at the Naval Postgraduate School in Monterey, California (9-12 April, 1991). This report is the proceedings of that workshop, as interpreted and expanded by the authors and reviewed by workshop participants and other members of the bio-optical research community. The protocols are a first prescription to approach unprecedented measurement accuracies implied by the SeaWiFS goals, and research and development are needed to improve the state-of-the-art in specific areas. The protocols should be periodically revised to reflect technical advances during the SeaWiFS Project cycle

SeaWiFS technical report series. Volume 24: SeaWiFS technical report series cumulative index, volumes 1-23

The Sea-viewing Wide Field-of-view Sensor (SeaWiFS) is the follow-on ocean color instrument to the Coastal Zone Color Scanner (CZCS), which ceased operations in 1986, after an eight-year mission. SeaWiFS is expected to be launched in 1995, on the SeaStar satellite, being built by Orbital Sciences Corporation (OSC). The SeaWiFS Project at the National Aeronautics and Space Administration's (NASA) Goddard Space Flight Center (GSFC), has undertaken the responsibility of documenting all aspects of this mission, which is critical to the ocean color and marine science communities. This documentation, entitled the SeaWiFS Technical Report Series, is the form of NASA Technical Memorandum Number 104566. All reports published are volumes within the series. This particular volume serves as a reference, or guidebook, to the previous 23 volumes and consists of 6 sections including: an errata, an addendum (summaries of various SeaWiFS Working Group Bio-optical Algorithm and Protocols Subgroups Workshops, and other auxiliary information), an index to key words and phrases, a list of all references cited, and lists of acronyms and symbols used. It is the editors' intention to publish a cumulative index of this type after every five volumes in the series. Each index covers the topics published in all previous editions, that is, each new index will include all of the information contained in the preceeding indices

SeaWiFS technical report series. Volume 18: SeaWiFS technical report series cumulative index: Volumes 1-17

The Sea-viewing Wide field-of-view Sensor (SeaWiFS) is the follow-on ocean color instrument to the Coastal Zone Color Scanner (CZCS) which ceased operations in 1986 after an eight-year mission. SeaWiFS is expected to be launched in 1995 on the SeaStar satellite, being built by Orbital Sciences Corporation (OSC). The SeaWiFS Project at the National Aeronautics and Space Administration's (NASA) Goddard Space Flight Center (GSFC), has undertaken the responsibility of documenting all aspects of this mission, which is critical to the ocean color and marine science communities. This documentation, entitled the SeaWiFS Technical Report Series, is in the form of NASA Technical Memorandum Number 104566. All reports published are volumes within the series. This particular volume serves as a reference, or guidebook, to the previous 17 volumes and consists of 6 sections including: an errata, an addendum (summaries of various SeaWiFS Working Group Bio-optical Algorithm and Protocols Subgroups Workshops, and other auxiliary information), an index to key words and phrases, a list of all references cited, and lists of acronyms and symbols used. It is the editor's intention to publish a cumulative index of this type after every five volumes in the series. Each index covers the topics published in all previous editions, that is, each new index includes all of the information contained in the preceding indices

Volume 14: The first SeaWiFS intercalibration round-robin experiment, SIRREX-1, July 1992

The results of the first Sea-viewing Wide Field-of-view Sensor (SeaWiFS) Intercalibration Round-Robin Experiment (SIRREX-1), which was held at the Center for Hydro-Optics and Remote Sensing (CHORS) at San Diego State University (SDSU) on 27-31 July 1992 are presetend. Oceanographic radiometers to be used in the SeaWiFS Calibration and Validation Program will be calibrated by individuals from the National Aeronautics and Space Administration's (NASA's) Goddard Space Flight Center (GSFC), CHORS, and seven other laboratories. The purpose of the SIRREX experiments is to assure the radiometric standards used in all of these laboratories are referenced to the same scales of spectral irradiance and radiance, which will be maintained by GSFC and periodically recalibrated by the National Institute of Standards and Technology (NIST). The spectral irradiance scale of GSFC's FEL lamp number F269 (recalibrated by NIST in October 1992) was transferred to lamps belonging to the 9 participating laboratories; l set of lamp transfer measurements (involving 4 of the lamps) was precise to within less than 1 percent and meets SeaWiFS goals, but a second set (involving another 14 lamps) did not. The spectral radiance scale of the GSFC 40-inch integrating sphere source was transferred to integrating sphere radiance sources belonging to four of the other laboratories. Reflectance plaques, used for irradiance-to-radiance transfer by five of the laboratories, were compared, but spectral bidirectional reflectance distribution functions (BRDF's) were not determined quantitatively. Also reported are results of similar comparisons (in October 1992) between the GSFC scales of spectral irradiance and radiance and those used by the Hughes/Santa Barbara Research Center (SBRC) to calibrate and characterize the SeaWiFS instrument. This first set of intercalibration round-robin experiments was a valuable learning experience for all participants, and led to several important procedural changes, which will be implemented in the second SIRREX, to be held at CHORS in June 1993

SeaWiFS technical report series. Volume 21: The heritage of SeaWiFS. A retrospective on the CZCS NIMBUS Experiment Team (NET) program

The Sea-viewing Wide Field-of-view Sensor (SeaWiFS) mission is based on the scientific heritage of the Coastal Zone Color Scanner (CZCS), a proof-of-concept instrument carried on the National Aeronautics and Space Administration (NASA) NIMBUS-7 environmental satellite for the purpose of measuring upwelling radiance from the ocean surface. The CZCS mission provided the first observations of ocean color from space, and over the mission lifetime of 1978-1986, allowed oceanographers an initial opportunity to observe the variable patterns of global biological productivity. One of the key elements of the CZCS mission was the formation of the CZCS NIMBUS Experiment Team (NET), a group of optical physicists and biological oceanographers. The CZCS NET was designated to validate the accuracy of the CZCS radiometric measurements and to connect the instrument's measurements to standard measures of oceanic biological productivity and optical seawater clarity. In the period following the cessation of CZCS observations, some of the insight and experience gained by the CZCS NET activity has dissipated as several proposed follow-on sensors failed to achieve active status. The Sea WiFS mission will be the first dedicated orbital successor to CZCS it in turn precedes observations by the Moderate Resolution Imaging Spectroradiometer (MODIS) of the Earth Observing System (EOS). Since the CZCS NET experience is an important model for Sea WiFS and MODIS surface truth efforts, this document is intended to provide a comprehensive review of the validation of oceanographic data for the first orbital ocean color sensor mission. This document also summarizes the history of the CZCS NET activities. The references listed in the Bibliography are a listing of published scientific research which relied upon the CZCS BET algorithms, or research which was conducted on the basis of CZCS mission elements

Age-specific incidence of A/H1N1 2009 influenza infection in England from sequential antibody prevalence data using likelihood-based estimation.

Estimating the age-specific incidence of an emerging pathogen is essential for understanding its severity and transmission dynamics. This paper describes a statistical method that uses likelihoods to estimate incidence from sequential serological data. The method requires information on seroconversion intervals and allows integration of information on the temporal distribution of cases from clinical surveillance. Among a family of candidate incidences, a likelihood function is derived by reconstructing the change in seroprevalence from seroconversion following infection and comparing it with the observed sequence of positivity among the samples. This method is applied to derive the cumulative and weekly incidence of A/H1N1 pandemic influenza in England during the second wave using sera taken between September 2009 and February 2010 in four age groups (1-4, 5-14, 15-24, 25-44 years). The highest cumulative incidence was in 5-14 year olds (59%, 95% credible interval (CI): 52%, 68%) followed by 1-4 year olds (49%, 95% CI: 38%, 61%), rates 20 and 40 times higher respectively than estimated from clinical surveillance. The method provides a more accurate and continuous measure of incidence than achieved by comparing prevalence in samples grouped by time period