The C Terminus of Ku80 activates the DNA-dependent protein kinase catalytic subunit

Ku is a heterodimeric protein with double-stranded DNA end-binding activity that operates in the process of nonhomologous end joining. Ku is thought to target the DNA-dependent protein kinase (DNA-PK) complex to the DNA and, when DNA bound, can interact and activate the DNA-PK catalytic subunit (DNA-PKcs). We have carried out a 3′ deletion analysis of Ku80, the larger subunit of Ku, and shown that the C-terminal 178 amino acid residues are dispensable for DNA end-binding activity but are required for efficient interaction of Ku with DNA-PKcs. Cells expressing Ku80 proteins that lack the terminal 178 residues have low DNA-PK activity, are radiation sensitive, and can recombine the signal junctions but not the coding junctions during V(D)J recombination. These cells have therefore acquired the phenotype of mouse SCID cells despite expressing DNA-PKcs protein, suggesting that an interaction between DNA-PKcs and Ku, involving the C-terminal region of Ku80, is required for DNA double-strand break rejoining and coding but not signal joint formation. To gain further insight into important domains in Ku80, we report a point mutational change in Ku80 in the defective xrs-2 cell line. This residue is conserved among species and lies outside of the previously reported Ku70-Ku80 interaction domain. The mutational change nonetheless abrogates the Ku70-Ku80 interaction and DNA end-binding activity

The angular dependent magnetoresistance in alpha-(BEDT-TTF)_2KHg(SCN)_4

In spite of extensive experimental studies of the angular dependent magnetoresistance (ADMR) of the low temperature phase (LTP) of alpha-(BEDT-TTF)_2KHg(SCN)_4 about a decade ago, the nature of LTP remains elusive. Here we present a new study of ADMR of LTP in alpha-(ET)_2 salts assuming that LTP is unconventional charge density wave (UCDW). In the presence of magnetic field the quasiparticle spectrum in UCDW is quantized, which gives rise to striking ADMR in UCDW. The present model appears to account for many existing ADMR data of alpha-(BEDT-TTF)_2KHg(SCN)_4 remarkably well.Comment: 6 pages, 4 figure

AMSA Conference Indigenous Workshop Summary

This report summarises a two-day Indigenous Workshop at the 2022 Australian Marine Sciences Association Conference. The workshop was the seventh to be supported by the National Environmental Science Program and the most significant to date in terms of Indigenous leadership and attendance. Indigenous participants from 45 language groups joined others from government, research and non-profit agencies. Indigenous organisations expressed a clear desire to work with government and research agencies to enable effective co-development of research, and to establish a nationally coordinated approach to Indigenous-led research and monitoring. The two-day Indigenous workshop brought together Indigenous leaders and community members from across the nation. This was a rare occasion for Indigenous Australians to come together and provide input into two important focal areas. 1. Collaborate and strategise on the research priorities, opportunities and constraints for Indigenous participation and leadership in environmental research in Australia’s marine and coastal regions. 2. Discuss the need for a National Indigenous Environmental Research Network (NIERN)

Cyclotron resonance in the layered perovskite superconductor Sr2RuO4

We report a detailed study of the magnetic-field-orientation dependence of the millimetre-wave magnetoconductivity of the superconductor Sr2RuO4 We find two harmonic series of cyclotron resonances. We assign the first, corresponding to a quasiparticle mass of $4.29 \pm 0.05 m_{\rm e}$, where $m_{\rm e}$ is the free-electron mass, to the $\beta$ Fermi-surface section. We assign the second series, which contains only odd harmonics, to cyclotron resonance of the $\gamma$ Fermi-surface section, yielding a quasiparticle mass of $12.35 \pm 0.20 m_{\rm e}$. A third, single cyclotron resonance, corresponding to a quasiparticle mass of $5.60 \pm 0.03 m_{\rm e}$, is attributed to the $\alpha$ Fermi-surface section. In addition, we find a very strong absorption mode in the presence of a magnetic field component parallel to the quasi-two-dimensional planes of the sample. Its dependence on the orientation of the magnetic field cannot be described in the context of conventional cyclotron resonance, and the origin of this mode is not yet clear.Comment: Submitted to J. Phys. Cond. Ma

Uncovering predictability in the evolution of the WTI oil futures curve

Accurately forecasting the price of oil, the world's most actively traded commodity, is of great importance to both academics and practitioners. We contribute by proposing a functional time series based method to model and forecast oil futures. Our approach boasts a number of theoretical and practical advantages including effectively exploiting underlying process dynamics missed by classical discrete approaches. We evaluate the finite-sample performance against established benchmarks using a model confidence set test. A realistic out-of-sample exercise provides strong support for the adoption of our approach with it residing in the superior set of models in all considered instances.Comment: 28 pages, 4 figures, to appear in European Financial Managemen

d0 Perovskite-Semiconductor Electronic Structure

We address the low-energy effective Hamiltonian of electron doped d0 perovskite semiconductors in cubic and tetragonal phases using the k*p method. The Hamiltonian depends on the spin-orbit interaction strength, on the temperature-dependent tetragonal distortion, and on a set of effective-mass parameters whose number is determined by the symmetry of the crystal. We explain how these parameters can be extracted from angle resolved photo-emission, Raman spectroscopy, and magneto-transport measurements and estimate their values in SrTiO3

The magnetic field dependence of the threshold electric field in unconventional charge density waves

Many experiments suggest that the unidentified low temperature phase (LTP) of alpha-(BEDT-TTF)_2KHg(SCN)_4 is most likely unconventional charge density wave (UCDW). To further this identification we present our theoretical study of the threshold electric field of UCDW in a magnetic field. The magnetic field-temperature phase diagram is very similar to those in a d-wave superconductor. We find a rather strong field dependence of the threshold electric field, which should be readily accessible experimentally.Comment: 7 pages, 6 figure

Imperfect nesting and transport properties in unconventional density waves

We consider the effect of imperfect nesting in quasi-one dimensional unconventional density waves. The phase diagram is very close to those in a conventional DW. The linear and non-linear aspects of the electric conductivity are discussed. At T=0 the frequency dependent electric conductivity develops a small dip at low frequencies. The threshold electric field depends strongly on the imperfect nesting parameter, allowing us to describe the measured threshold electric field in the low temperature phase of the quasi-two dimensional organic conductor, alpha-(BEDT-TTF)_2KHg(SCN)_4 very well.Comment: 9 pages, 9 figure

The clonal structure and dynamics of the human T cell response to an organic chemical hapten

Diphenylcyclopropenone (DPC) is an organic chemical hapten which induces allergic contact dermatitis, and is used in treatment of warts, melanoma and alopecia areata. This therapeutic setting therefore provided an opportunity to study T cell receptor (TCR) repertoire changes in response to hapten sensitization in humans. Repeated exposure to DPC induced highly dynamic transient expansions of a polyclonal diverse T cell population. The number of TCRs expanded early after sensitization varies between individuals, and predicts the magnitude of the allergic reaction. The expanded TCRs show preferential TCR V and J gene usage, and consist of clusters of TCRs with similar sequences, two characteristic features of antigen-driven responses. The expanded TCRs share subtle sequence motifs that can be captured using a Dynamic Bayesian Network. These observations suggest the response to DPC is mediated by a polyclonal population of T cells recognizing a small number of dominant antigens