An infrared study of modern and paleo-filamentous bacteria from Rio Tinto, Spain

The Rio Tinto River Basin in southwestern Spain is a natural acidic (pH ~2.3) drainage system that supports a diversity of acid tolerant bacteria and eukaryotes with iron and sulfur- oxidizing prokaryotes performing chemolithotrophy and supporting anaerobic respiration [1, 2]. River terrace deposits formed over the past 2 Myr have preserved remnants of this unique biosphere, particularly microbial filaments, which provide templates for iron sulphate and iron oxide precipitation [1, 2]. This process of permineralization causes organic material to become trapped within a mineral matrix and preserved over geological time. This study analysed cultured filamentous bacteria, modern biofilms and sediments, and river terrace deposits spanning 2.1 Myr to assess the preservation of organics in this extreme environment over time, and the ability to correlate them with a contemporary culture. Filamentous bacteria are preserved within optically translucent nanophase to crystalline jarosite and goethite within all samples. The cultures contained 1 μm diameter filaments, some partially encrusted with iron oxides with visible cell walls, and others completely free of iron oxides, that are morphologically comparable to those preserved in the Rio Tinto rock record. Organic compounds (e.g. aliphatic hydrocarbons, amides and carboxylic acids) were detected at various levels within the culture and river terraces using mid-IR spectroscopy. Rio Tinto is a natural laboratory allowing living cells to be studied and correlated to morphological and biomolecular fossils in the geological record. These deposits will provide predictive tools for biomarker studies that may be extended to analogous environments on ancient Earth or even Mars. [1] Fernández-Remolar et al. (2005) Earth Planet Sci Lett 240,149-167. [2] Fernández-Remolar & Knoll (2008) Icarus 194,72-85

Biogeochemical cycling of silver in acidic, weathering environments

Under acidic, weathering conditions, silver (Ag) is considered to be highly mobile and can be dispersed within near-surface environments. In this study, a range of regolith materials were sampled from three abandoned open pit mines located in the Iberian Pyrite Belt, Spain. Samples were analyzed for Ag mineralogy, content, and distribution using micro-analytical techniques and high-resolution electron microscopy. While Ag concentrations were variable within these materials, elevated Ag concentrations occurred in gossans. The detection of Ag within younger regolith materials, i.e., terrace iron formations and mine soils, indicated that Ag cycling was a continuous process. Microbial microfossils were observed within crevices of gossan and their presence highlights the preservation of mineralized cells and the potential for biogeochemical processes contributing to metal mobility in the rock record. An acidophilic, iron-oxidizing microbial consortium was enriched from terrace iron formations. When the microbial consortium was exposed to dissolved Ag, more than 90% of Ag precipitated out of solution as argentojarosite. In terms of biogeochemical Ag cycling, this demonstrates that Ag re-precipitation processes may occur rapidly in comparison to Ag dissolution processes. The kinetics of Ag mobility was estimated for each type of regolith material. Gossans represented 0.6–146.7 years of biogeochemical Ag cycling while terrace iron formation and mine soils represented 1.9–42.7 years and 0.7–1.6 years of Ag biogeochemical cycling, respectively. Biogeochemical processes were interpreted from the chemical and structural characterization of regolith material and demonstrated that Ag can be highly dispersed throughout an acidic, weathering environment.Jeremiah Shuster, Frank Reith, Matthew R. M. Izawa, Roberta L. Flemming, Neil R. Banerjee and Gordon Southa

Phases of QCD at High Baryon Density

We review recent work on the phase structure of QCD at very high baryon density. We introduce the phenomenon of color superconductivity and discuss how the quark masses and chemical potentials determine the structure of the superfluid quark phase. We comment on the possibility of kaon condensation at very high baryon density and study the competition between superfluid, density wave, and chiral crystal phases at intermediate density.Comment: 15 pages. To appear in the proceedings of the ECT Workshop on Neutron Star Interiors, Trento, Italy, June 200

On the Applicability of Weak-Coupling Results in High Density QCD

Quark matter at asymptotically high baryon chemical potential is in a color superconducting state characterized by a gap Delta. We demonstrate that although present weak-coupling calculations of Delta are formally correct for mu -> Infinity, the contributions which have to this point been neglected are large enough that present results can only be trusted for mu >> mu_c ~ 10^8 MeV. We make this argument by using the gauge dependence of the present calculation as a diagnostic tool. It is known that the present calculation yields a gauge invariant result for mu -> Infinity; we show, however, that the gauge dependence of this result only begins to decrease for mu > mu_c, and conclude that the result can certainly not be trusted for mu < mu_c. In an appendix, we set up the calculation of the influence of the Meissner effect on the magnitude of the gap. This contribution to Delta is, however, much smaller than the neglected contributions whose absence we detect via the resulting gauge dependence.Comment: 21 pages, 3 figures, uses LaTeX2e and ReVTeX, updated figures, made minor text change

Spontaneous symmetry breaking in strong-coupling lattice QCD at high density

We determine the patterns of spontaneous symmetry breaking in strong-coupling lattice QCD in a fixed background baryon density. We employ a next-nearest-neighbor fermion formulation that possesses the SU(N_f)xSU(N_f) chiral symmetry of the continuum theory. We find that the global symmetry of the ground state varies with N_f and with the background baryon density. In all cases the condensate breaks the discrete rotational symmetry of the lattice as well as part of the chiral symmetry group.Comment: 10 pages, RevTeX 4; added discussion of accidental degeneracy of vacuum after Eq. (35

Field localization in warped gauge theories

We present four-dimensional gauge theories that describe physics on five-dimensional curved (warped) backgrounds, which includes bulk fields with various spins (vectors, spinors, and scalars). Field theory on the AdS$_5$ geometry is examined as a simple example of our formulation. Various properties of bulk fields on this background, e.g., the mass spectrum and field localization behavior, can be achieved within a fully four-dimensional framework. Moreover, that gives a localization mechanism for massless vector fields. We also consider supersymmetric cases, and show in particular that the conditions on bulk masses imposed by supersymmetry on warped backgrounds are derived from a four-dimensional supersymmetric theory on the flat background. As a phenomenological application, models are shown to generate hierarchical Yukawa couplings. Finally, we discuss possible underlying mechanisms which dynamically realize the required couplings to generate curved geometries.Comment: 24 pages, 12 figures; more explanation of nonuniversal gauge couplings added, typos corrected, references update

Superdense Matter

We review recent work on the phase structure of QCD at very high baryon density. We introduce the phenomenon of color superconductivity and discuss the use of weak coupling methods. We study the phase structure as a function of the number of flavors and their masses. We also introduce effective theories that describe low energy excitations at high baryon density. Finally, we study the possibility of kaon condensation at very large baryon density.Comment: 13 pages, talk at ICPAQGP, Jaipur, India, Nov. 26-30, 2001; to appear in the proceeding

SU(7) Unification of SU(3)_C*SU(4)_W* U(1)_{B-L}

We propose the SUSY SU(7) unification of the SU(3)_C* SU(4)_W* U(1)_{B-L} model. Such unification scenario has rich symmetry breaking chains in a five-dimensional orbifold. We study in detail the SUSY SU(7) symmetry breaking into SU(3)_C* SU(4)_W* U(1)_{B-L} by boundary conditions in a Randall-Sundrum background and its AdS/CFT interpretation. We find that successful gauge coupling unification can be achieved in our scenario. Gauge unification favors low left-right and unification scales with tree-level \sin^2\theta_W=0.15. We use the AdS/CFT dual of the conformal supersymmetry breaking scenario to break the remaining N=1 supersymmetry. We employ AdS/CFT to reproduce the NSVZ formula and obtain the structure of the Seiberg duality in the strong coupling region for 3/2N_c<N_F<3N_C. We show that supersymmetry is indeed broken in the conformal supersymmetry breaking scenario with a vanishing singlet vacuum expectation value.Comment: 25 pages, 1 figure

Debye screening and Meissner effect in a three-flavor color superconductor

I compute the gluon self-energy in a color superconductor with three flavors of massless quarks, where condensation of Cooper pairs breaks the color and flavor SU(3)_c x U(3)_V x U(3)_A symmetry of QCD to the diagonal subgroup SU(3)_{c+V}. At zero temperature, all eight electric gluons obtain a Debye screening mass, and all eight magnetic gluons a Meissner mass. The Debye as well as the Meissner masses are found to be equal for the different gluon colors. These masses determine the coefficients of the kinetic terms in the effective theory for the low-energy degrees of freedom. Their values agree with those obtained by Son and Stephanov.Comment: 10 pages, 1 figure (eps

Crystalline Color Superconductivity

In any context in which color superconductivity arises in nature, it is likely to involve pairing between species of quarks with differing chemical potentials. For suitable values of the differences between chemical potentials, Cooper pairs with nonzero total momentum are favored, as was first realized by Larkin, Ovchinnikov, Fulde and Ferrell (LOFF). Condensates of this sort spontaneously break translational and rotational invariance, leading to gaps which vary periodically in a crystalline pattern. Unlike the original LOFF state, these crystalline quark matter condensates include both spin zero and spin one Cooper pairs. We explore the range of parameters for which crystalline color superconductivity arises in the QCD phase diagram. If in some shell within the quark matter core of a neutron star (or within a strange quark star) the quark number densities are such that crystalline color superconductivity arises, rotational vortices may be pinned in this shell, making it a locus for glitch phenomena.Comment: 40 pages, LaTeX with eps figs. v2: New paragraph on Ginzburg-Landau treatment of LOFF phase in section 5. References added. v3: Small changes only. Version to appear in Phys. Rev.