Analysis of the proteinaceous components of the organic matrix of calcitic sclerites from the soft coral Sinularia sp.

An organic matrix consisting of a protein-polysaccharide complex is generally accepted as an important medium for the calcification process. While the role this "calcified organic matrix" plays in the calcification process has long been appreciated, the complex mixture of proteins that is induced and assembled during the mineral phase of calcification remains uncharacterized in many organisms. Thus, we investigated organic matrices from the calcitic sclerites of a soft coral, Sinularia sp., and used a proteomic approach to identify the functional matrix proteins that might be involved in the biocalcification process. We purified eight organic matrix proteins and performed in-gel digestion using trypsin. The tryptic peptides were separated by nano-liquid chromatography (nano-LC) and analyzed by tandem mass spectrometry (MS/MS) using a matrix-assisted laser desorption/ionization (MALDI) - time-of-flight-time-of-flight (TOF-TOF) mass spectrometer. Periodic acid Schiff staining of an SDS-PAGE gel indicated that four proteins were glycosylated. We identified several proteins, including a form of actin, from which we identified a total of 183 potential peptides. Our findings suggest that many of those peptides may contribute to biocalcification in soft corals

Gabbroic-dioritic dykes from the Sanadaj-Sirjan Zone: windows on Jurassic and Eocene geodynamic processes in the Zagros Orogen, western Iran

The Sanandaj-Sirjan Zone (SaSiZ) is a magmatic terrane within the Zagros Orogen, western Iran, marking the Tethyan suture zone between the Afro-Arabian Plate and the Central Iran Micro-Continent. Mafic-intermediate dyke swarms with Middle Jurassic (Group-1: hornblende gabbro and diorite) and Late Eocene (Group-2: hornblende-pyroxene gabbro) ages are recognized in the Malayer-Boroujerd Plutonic Complex of the northern SaSiZ. Group-1 dykes have elemental and isotopic signatures consistent with melting of a mantle source modified during Neo-Tethyan subduction. Some Group-1 magmas evolved to intermediate compositions through assimilation and fractional crystallization. Group-2 dykes have within-plate trace element geochemical signatures, modelled as deriving from low-degree melting of asthenospheric mantle without a subduction influence. Published models postulate either a Cretaceous-Eocene Neo-Tethyan flat-slab scenario, or a Latest Cretaceous-Palaeogene Neo-Tethyan break-off event beneath the SaSiZ. Such models do not reconcile with the Late Eocene presence of within-plate magmatism in westernmost Iran, very close to the Zagros Suture. We argue that a period of flat-slab subduction concluded with sub-parallel subduction of a Neo-Tethyan ridge to the trench. The resulting slab break-off event in the Late Eocene is responsible for generation of the distinct Mesopotamia and Zagros slabs in mantle tomography models. Break-off was followed by small volume within-plate type magmatism before short-lived re-establishment of Tethyan subduction prior to the final Arabia-Eurasia collision

Mesozoic-Cenozoic mafic magmatism in Sanandaj-Sirjan Zone, Zagros Orogen (Western Iran): geochemical and isotopic inferences from Middle Jurassic and Late Eocene gabbros

One of the consequences of Neo-Tethys ocean subduction beneath the Central Iranian Micro-continent (CIMC) is the development of rare gabbroic intrusions in the Malayer-Boroujerd Plutonic Complex (MBPC) located in the Sanandaj-Sirjan Zone (SaSZ) of the Zagros Orogenic belt. The MBPC is a suite of extensive felsic and lesser mafic magmatic products in the northern SaSZ with geochemical signatures of arc-like magmatism during the Middle Jurassic (Ghorveh-Aligudarz arc) and intraplate type in the Late Eocene. Middle Jurassic gabbros (non-cumulate and cumulate) have low-Ti concentrations (< 1 wt. %) and quite uniform isotopic compositions (initial 87Sr/86Sr: 0.7035‒0.70593 and εNd(t): - 6.18‒-0.7), enriched LILE relative to HFSE, variable fractionation between the LREE and HREE ((La/Yb)cn: 2.27‒7.45) and both negative to positive Eu anomalies. These distinctive features of arc-type magmatism are consistent with a subduction-modified mantle source for these rocks. Trace element and REE models indicate ~ 15% melting of a metasomatized amphibole-bearing garnet-spinel lherzolite (garnet:spinel ~ 7:3) in the sub-arc mantle wedge. The cumulate gabbros and non-cumulates belong to common liquid line of descent, with complementary trace element patterns. Much of the variation between samples can be modeled by fractional crystallization (FC) of a common parent; only one cumulate gabbro from this suite exhibits isotopic evidence of contamination, probably by Rb-depleted crustal materials. The Late Eocene gabbros have relatively high Ti (>1 wt. %) and display isotopically depleted Sr-Nd values (initial 87Sr/86Sr: 0.7044-0.7087, εNd(t): 1.9-+3.2, barring one crustally contaminated sample). OIB-like trace element characteristics such as enriched HFSE, and only minor enrichment of LILE and LREE, reflect a within-plate character and asthenospheric source. Trace element modeling indicates small degree melting (fmelting: 0.05) of upper mantle lherzolite (garnet:spinel ~ 3:1) followed by higher degree melting (fmelting: 0.15) at shallower depths (garnet:spinel ~4.5:2). The Eocene parental magma underwent FC of olivine and clinopyroxene. We propose that Eocene asthenospheric upwelling was triggered by slab tearing in response to slab-rollback, which is elsewhere reported to have triggered a 'flareup' of extension-related magmatism across Iran. Three stages of tectonomagmatic evolution in the Ghorveh-Aligudarz arc segment of the N-SaSZ are represented by: 1) arc-like magmatism during active subduction of the Neo-Tethys seaway at Middle Jurassic, 2) magmatic quiescence during an interval of shallow-angle or highly oblique subduction during the Cretaceous‒Paleocene, and 3) asthenosphere melting during slab tearing shortly before the onset of the Arabia-Eurasia collision

Subduction-related mafic to felsic magmatism in the Malayer-Boroujerd plutonic complex, western Iran

The Malayer–Boroujerd plutonic complex (MBPC) in western Iran, consists of a portion of a magmatic arc built by the northeast verging subduction of the Neo-Tethys plate beneath the Central Iranian Microcontinent (CIMC). Middle Jurassic-aged felsic magmatic activity in MBPC is manifested by I-type and S-type granites. The mafic rocks include gabbroic intrusions and dykes and intermediate rocks are dioritic dykes and minor intrusions, as well as mafic microgranular enclaves (MMEs). MBPC Jurassic-aged rocks exhibit arc-like geochemical signatures, as they are LILE- and LREE-enriched and HFSE- and HREE-depleted and display negative Nb–Ta anomalies. The gabbro dykes and intrusions originated from metasomatically enriched garnet-spinel lherzolite [Degree of melting (fmel) ~ 15%] and exhibit negative Nd and positive to slightly negative εHf(T) (+ 3.0 to − 1.6). The data reveal that evolution of Middle Jurassic magmatism occurred in two stages: (1) deep mantle-crust interplay zone and (2) the shallow level upper crustal magma chamber. The geochemical and isotopic data, as well as trace element modeling, indicate the parent magma for the MBPC S-type granites are products of upper crustal greywacke (fmel: 0.2), while I-type granites formed by partial melting of amphibolitic lower crust (fmel: 0.25) and mixing with upper crustal greywacke melt in a shallow level magma chamber [Degree of mixing (fmix): 0.3]. Mixing between andesitic melt leaving behind a refractory dense cumulates during partial crystallization of mantle-derived magma and lower crustal partial melt most likely produced MMEs (fmix: 0.2). However, enriched and moderately variable εNd(T) (− 3.21 to − 4.33) and high (87Sr/86Sr)i (0.7085–0.7092) in dioritic intrusions indicate that these magmas are likely experienced assimilation of upper crustal materials. The interpretations of magmatic activity in the MBPC is consistent with the role considered for mantle-derived magma as heat and mass supplier for initiation and evolution of magmatism in continental arc setting, elsewhere

Progressive Relapse of Ligamentum Flavum Ossification Following Decompressive Surgery

Thoracic ossification of the ligamentum flavum (T-OLF) is a relatively rare spinal disorder that generally requires surgical intervention, due to its progressive nature and the poor response to conservative therapy. The prevalence of OLF has been reported at 3.8%-26%, which is similar to that of cervical ossification of the posterior longitudinal ligament (OPLL). The progression of OPLL after cervical laminoplasty for the treatment of OPLL is often shown in long-term follow-up. However, there have been no reports on the progression of OLF following surgery. We report a case of thoracic myelopathy secondary to the progressive relapse of OLF following laminectomy

Soft Coral Sarcophyton (Cnidaria: Anthozoa: Octocorallia) Species Diversity and Chemotypes

Research on the soft coral genus Sarcophyton extends over a wide range of fields, including marine natural products and the isolation of a number of cembranoid diterpenes. However, it is still unknown how soft corals produce this diverse array of metabolites, and the relationship between soft coral diversity and cembranoid diterpene production is not clear. In order to understand this relationship, we examined Sarcophyton specimens from Okinawa, Japan, by utilizing three methods: morphological examination of sclerites, chemotype identification, and phylogenetic examination of both Sarcophyton (utilizing mitochondrial protein-coding genes MutS homolog: msh1) and their endosymbiotic Symbiodinium spp. (utilizing nuclear internal transcribed spacer of ribosomal DNA: ITS- rDNA). Chemotypes, molecular phylogenetic clades, and sclerites of Sarcophyton trocheliophorum specimens formed a clear and distinct group, but the relationships between chemotypes, molecular phylogenetic clade types and sclerites of the most common species, Sarcophyton glaucum, was not clear. S. glaucum was divided into four clades. A characteristic chemotype was observed within one phylogenetic clade of S. glaucum. Identities of symbiotic algae Symbiodinium spp. had no apparent relation to chemotypes of Sarcophyton spp. This study demonstrates that the complex results observed for S. glaucum are due to the incomplete and complex taxonomy of this species group. Our novel method of identification should help contribute to classification and taxonomic reassessment of this diverse soft coral genus

The endogenous proteoglycan-degrading enzyme ADAMTS-4 promotes functional recovery after spinal cord injury

<p>Abstract</p> <p>Background</p> <p>Chondroitin sulfate proteoglycans are major inhibitory molecules for neural plasticity under both physiological and pathological conditions. The chondroitin sulfate degrading enzyme chondroitinase ABC promotes functional recovery after spinal cord injury, and restores experience-dependent plasticity, such as ocular dominance plasticity and fear erasure plasticity, in adult rodents. These data suggest that the sugar chain in a proteoglycan moiety is essential for the inhibitory activity of proteoglycans. However, the significance of the core protein has not been studied extensively. Furthermore, considering that chondroitinase ABC is derived from bacteria, a mammalian endogenous enzyme which can inactivate the proteoglycans' activity is desirable for clinical use.</p> <p>Methods</p> <p>The degradation activity of ADAMTS-4 was estimated for the core proteins of chondroitin sulfate proteoglycans, that is, brevican, neurocan and phosphacan. To evaluate the biological significance of ADMATS-4 activity, an <it>in vitro </it>neurite growth assay and an <it>in vivo </it>neuronal injury model, spinal cord contusion injury, were employed.</p> <p>Results</p> <p>ADAMTS-4 digested proteoglycans, and reversed their inhibition of neurite outgrowth. Local administration of ADAMTS-4 significantly promoted motor function recovery after spinal cord injury. Supporting these findings, the ADAMTS-4-treated spinal cord exhibited enhanced axonal regeneration/sprouting after spinal cord injury.</p> <p>Conclusions</p> <p>Our data suggest that the core protein in a proteoglycan moiety is also important for the inhibition of neural plasticity, and provides a potentially safer tool for the treatment of neuronal injuries.</p

Preliminary Report of KR03-04 Leg-1 Cruise

調査海域: 西フィリピン海盆, 四国海盆南部 / Area: Philippine Basin, Shikoku Basin ; 期間: 2003年4月15日～2003年5月2日 / Operation Period: April 15, 2003～May 2, 2003http://www.godac.jamstec.go.jp/darwin/cruise/kairei/kr03-04_leg1/

Cruise Report of KR04-14 Leg-1 Cruise

調査海域: 西フィリピン海盆 / Area: Philippine Basin ; 期間: 2004年11月3日～2004年11月22日 / Operation Period: November 3, 2004～November 22, 2004http://www.godac.jamstec.go.jp/darwin/cruise/kairei/kr04-14_leg1/