26 research outputs found
Generalizable Synthetic Image Detection via Language-guided Contrastive Learning
The heightened realism of AI-generated images can be attributed to the rapid
development of synthetic models, including generative adversarial networks
(GANs) and diffusion models (DMs). The malevolent use of synthetic images, such
as the dissemination of fake news or the creation of fake profiles, however,
raises significant concerns regarding the authenticity of images. Though many
forensic algorithms have been developed for detecting synthetic images, their
performance, especially the generalization capability, is still far from being
adequate to cope with the increasing number of synthetic models. In this work,
we propose a simple yet very effective synthetic image detection method via a
language-guided contrastive learning and a new formulation of the detection
problem. We first augment the training images with carefully-designed textual
labels, enabling us to use a joint image-text contrastive learning for the
forensic feature extraction. In addition, we formulate the synthetic image
detection as an identification problem, which is vastly different from the
traditional classification-based approaches. It is shown that our proposed
LanguAge-guided SynThEsis Detection (LASTED) model achieves much improved
generalizability to unseen image generation models and delivers promising
performance that far exceeds state-of-the-art competitors by +22.66% accuracy
and +15.24% AUC. The code is available at https://github.com/HighwayWu/LASTED
Whole transcriptome analysis reveals that immune infiltration- lncRNAs are related to cellular apoptosis in liver transplantation
IntroductionIn most instances, liver transplantation (LT) is the only available treatment for end‐stage liver diseases. However, LT could also induce serious liver diseases or injury, and the underlying mechanisms of LT-induced complications remain largely unknown, especially the mechanisms of the dysfunction of the immune system mediated by long noncoding RNAs (lncRNAs).MethodsIn this study, we globally analyzed the proportion of immune cells by using the transcriptome sequencing data (RNA-seq) of needle-core liver biopsies from pre- and post-transplantation recipients. Dysregulated lncRNAs were found to be correlated with the altered fractions of immune cells. We finally explored the potential targets of dysregulated lncRNAs and analyzed their functions in LT.ResultsWe found that in the samples, some immune cells changed significantly after LT, including CD4 T cells, NK cells and mast cells. The proportion of macrophages in different polarization states also changed significantly, with M0 macrophages increasing and M2 macrophages decreasing. Through weighted gene co-expression network analysis (WGCNA), 7 gene expression modules related to LT were identified. These modules were related to changes in the proportion of different immune cells. The functions of these modules represent the response modes of different functional genes after LT. Among these modules, MEtan and MEyellow modules were primarily enriched in apoptosis and inflammatory pathways. Twelve immunity-related lncRNAs were identified for the first time, and the regulatory network co-changing with immune cells was also identified. The co-expressed genes of these lncRNAs were highly enriched in apoptosis-related pathways. Many apoptosis-related genes were found to be up-regulated after LT.DiscussionIn summary, we speculated that the expression and regulation of these apoptotic genes may be related to the changes in the proportion of immune cells. Some of these lncRNAs and apoptosis-related genes have been reported to be related to cell proliferation and apoptosis. They are also potential biomarkers or therapeutic targets
Biological activities of fusarochromanone: a potent anti-cancer agent
Background
Fusarochromanone (FC101) is a small molecule fungal metabolite with a host of interesting biological functions, including very potent anti-angiogenic and direct anti-cancer activity. Results
Herein, we report that FC101 exhibits very potent in-vitro growth inhibitory effects (IC50 ranging from 10nM-2.5 μM) against HaCat (pre-malignant skin), P9-WT (malignant skin), MCF-7 (low malignant breast), MDA-231 (malignant breast), SV-HUC (premalignant bladder), UM-UC14 (malignant bladder), and PC3 (malignant prostate) in a time-course and dose-dependent manner, with the UM-UC14 cells being the most sensitive. FC101 induces apoptosis and an increase in proportion of cells in the sub-G1 phase in both HaCat and P9-WT cell lines as evidenced by cell cycle profile analysis. In a mouse xenograft SCC tumor model, FC101 was well tolerated, non-toxic, and achieved a 30% reduction in tumor size at a dose of 8 mg/kg/day. FC101 is also a potent anti-angiogenenic agent. At nanomolar doses, FC101 inhibits the vascular endothelial growth factor-A (VEGF-A)-mediated proliferation of endothelial cells. Conclusions
Our data presented here indicates that FC101 is an excellent lead candidate for a small molecule anti-cancer agent that simultaneously affects angiogenesis signaling, cancer signal transduction, and apoptosis. Further understanding of the underlying FC101’s molecular mechanism may lead to the design of novel targeted and selective therapeutics, both of which are pursued targets in cancer drug discovery
Cognition, Aryl Hydrocarbon Receptor Repressor Methylation, and Abstinence Duration-Associated Multimodal Brain Networks in Smoking and Long-Term Smoking Cessation
Cigarette smoking and smoking cessation are associated with changes in cognition and DNA methylation; however, the neurobiological correlates of these effects have not been fully elucidated, especially in long-term cessation. Cognitive performance, percent methylation of the aryl hydrocarbon receptor repressor (AHRR) gene, and abstinence duration were used as references to supervise a multimodal fusion analysis of functional, structural, and diffusion magnetic resonance imaging (MRI) data, in order to identify associated brain networks in smokers and ex-smokers. Correlations among these networks and with smoking-related measures were performed. Cognition-, methylation-, and abstinence duration-associated networks discriminated between smokers and ex-smokers and correlated with differences in fractional amplitude of low frequency fluctuations (fALFF) values, gray matter volume (GMV), and fractional anisotropy (FA) values. Long-term smoking cessation was associated with more accurate cognitive performance, as well as lower fALFF and more GMV in the hippocampus complex. The methylation- and abstinence duration-associated networks positively correlated with smoking-related measures of abstinence duration and percent methylation, respectively, suggesting they are complementary measures. This analysis revealed structural and functional co-alterations linked to smoking abstinence and cognitive performance in brain regions including the insula, frontal gyri, and lingual gyri. Furthermore, AHRR methylation, a promising epigenetic biomarker of smoking recency, may provide an important complement to self-reported abstinence duration
Cognition, Aryl Hydrocarbon Receptor Repressor Methylation, and Abstinence Duration-Associated Multimodal Brain Networks in Smoking and Long-Term Smoking Cessation
Cigarette smoking and smoking cessation are associated with changes in cognition and DNA methylation; however, the neurobiological correlates of these effects have not been fully elucidated, especially in long-term cessation. Cognitive performance, percent methylation of the aryl hydrocarbon receptor repressor (AHRR) gene, and abstinence duration were used as references to supervise a multimodal fusion analysis of functional, structural, and diffusion magnetic resonance imaging (MRI) data, in order to identify associated brain networks in smokers and ex-smokers. Correlations among these networks and with smoking-related measures were performed. Cognition-, methylation-, and abstinence duration-associated networks discriminated between smokers and ex-smokers and correlated with differences in fractional amplitude of low frequency fluctuations (fALFF) values, gray matter volume (GMV), and fractional anisotropy (FA) values. Long-term smoking cessation was associated with more accurate cognitive performance, as well as lower fALFF and more GMV in the hippocampus complex. The methylation- and abstinence duration-associated networks positively correlated with smoking-related measures of abstinence duration and percent methylation, respectively, suggesting they are complementary measures. This analysis revealed structural and functional co-alterations linked to smoking abstinence and cognitive performance in brain regions including the insula, frontal gyri, and lingual gyri. Furthermore, AHRR methylation, a promising epigenetic biomarker of smoking recency, may provide an important complement to self-reported abstinence duration
Understanding the Interactive Relationship between Aliphatic Series Deep Eutectic Solvents and Lignocellulosic Dimer Model Compounds
Clean, efficient, and selective separation
of lignin from lignocellulosic
biomass is a challenging yet popular topic of study to achieve biomass
conversion and high-value utilization. Unlike conventional acid, alkaline
water, and most organic solvents, the main components of lignocellulosic
biomass were found to selectively dissolve in certain classes of deep
eutectic solvents (DESs). However, the mechanism of selective dissolution
is still not well defined. In this paper, we started from the perspective
of the interactive mechanism of DESs and the structural unit of lignocellulose
and conducted a comprehensive analysis of the relationship between
different types of DESs and complexes of DESs with four kinds of lignocellulosic
dimer model compounds (interaction energy, hydrogen bond) using the
molecular dynamics method. Some main findings are as follows: for
the same atomic number of linear carbon chains, interaction energies
of 2c-DESs or 3c-DESs are more conspicuous in the presence of an aliphatic
HBD with double −COOH group compared with single −COOH,
single −COOH + single OH, or double −OH; DESs with a
short carbon chain HBD are more compatible with four lignocellulosic
dimer model compounds (LDMCs) than DESs with a long carbon chain HBD;
two-constituent DESs are more compatible with GG lignin models compared
with SS when the HBD contains double −COOH or single −COOH
groups. When analyzing the hydrogen bond of DESs or the complexes
of DESs with lignocellulosic dimer model compounds, the coordination
number of hydrogen bonds was in the order: dicarboxylic acids >
hydroxy
acids > diols > monocarboxylic acids in C2, C3, and C5 chain
HBDs.
This work intends to achieve a deeper and more comprehensive mechanism
knowledge of the interaction between DESs and different components
of lignocellulose and aims to help with screening the DESs for better
selective conversion of components of lignocellulosic biomass, as
well as opening new perspectives in the biorefinery green process
A Comprehensive View on the Protein Functions of Porcine Epidemic Diarrhea Virus
Porcine epidemic diarrhea (PED) virus (PEDV) is one of the main pathogens causing diarrhea in piglets and fattening pigs. The clinical signs of PED are vomiting, acute diarrhea, dehydration, and mortality resulting in significant economic losses and becoming a major challenge in the pig industry. PEDV possesses various crucial structural and functional proteins, which play important roles in viral structure, infection, replication, assembly, and release, as well as in escaping host innate immunity. Over the past few years, there has been progress in the study of PEDV pathogenesis, revealing the crucial role of the interaction between PEDV viral proteins and host cytokines in PEDV infection. At present, the main control measure against PEDV is vaccine immunization of sows, but the protective effect for emerging virus strains is still insufficient, and there is no ideal safe and efficient vaccine. Although scientists have persistently delved their research into the intricate structure and functionalities of the PEDV genome and viral proteins for years, the pathogenic mechanism of PEDV remains incompletely elucidated. Here, we focus on reviewing the research progress of PEDV structural and nonstructural proteins to facilitate the understanding of biological processes such as PEDV infection and pathogenesis
Relationship between different intestinal microflora and cholelithiasis: A systematic review and meta-analysis
Dihydroartemisinin inhibits the mammalian target of rapamycin-mediated signaling pathways in tumor cells
Counterintuitive Ballistic and Directional Liquid Transport on a Flexible Droplet Rectifier
Achieving the directional and long-range droplet transport on solid surfaces is widely preferred for many practical applications but has proven to be challenging. Particularly, directionality and transport distance of droplets on hydrophobic surfaces are mutually exclusive. Here, we report that drain fly, a ubiquitous insect maintaining nonwetting property even in very high humidity, develops a unique ballistic droplet transport mechanism to meet these demanding challenges. The drain fly serves as a flexible rectifier to allow for a directional and long-range propagation as well as self-removal of a droplet, thus suppressing unwanted liquid flooding. Further investigation reveals that this phenomenon is owing to the synergistic conjunction of multiscale roughness, structural periodicity, and flexibility, which rectifies the random and localized droplet nucleation (nanoscale and microscale) into a directed and global migration (millimeter-scale). The mechanism we have identified opens up a new approach toward the design of artificial rectifiers for broad applications