1,389 research outputs found

    6-Formyl-2-naphthyl cis-1,5,7-trimethyl-2,4-dioxo-3-aza­bicyclo­[3.3.1]nonane-7-carboxyl­ate

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    In the title compound, C23H23NO5, the C5N ring adopts an envelope conformation with a C atom as the flap, whilst the saturated C6 ring fused to it adopts a chair conformation. In the crystal, inversion dimers linked by pairs of N—H⋯O hydrogen bonds generate R 2 2(8) loops

    Detecting Chiral Magnetic Effect via Deep Learning

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    The search of chiral magnetic effect (CME) in heavy-ion collisions has attracted long-term attentions. Multiple observables have been proposed but all suffer from obstacles due to large background contaminations. In this Letter, we construct an observable-independent CME-meter based on a deep convolutional neural network. After trained over data set generated by a multiphase transport model, the CME-meter shows high accuracy in recognizing the CME-featured charge separation from the final-state pion spectra. It also exhibits remarkable robustness to diverse conditions including different collision energies, centralities, and elliptic flow backgrounds. In a transfer learning manner, the CME-meter is validated in isobaric collision systems, showing good transferability among different colliding systems. Based on variational approaches, we utilize the DeepDream method to derive the most responsive CME-spectra that demonstrates the physical contents the machine learns.Comment: 7 pages, 10 figure

    Patterns and influencing factor of synonymous codon usage in porcine circovirus

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    <p>Abstract</p> <p>Background</p> <p>Analysis of codon usage can reveal much about the molecular evolution of the viruses. Nevertheless, little information about synonymous codon usage pattern of porcine circovirus (PCV) genome in the process of its evolution is available. In this study, to give a new understanding on the evolutionary characteristics of PCV and the effects of natural selection from its host on the codon usage pattern of the virus, Patterns and the key determinants of codon usage in PCV were examined.</p> <p>Methods</p> <p>We carried out comprehensive analysis on codon usage pattern in the PCV genome, by calculating relative synonymous codon usage (RSCU), effective number of codons (ENC), dinucleotides and nucleic acid content of the PCV genome.</p> <p>Results</p> <p>PCV genomes have relatively much lower content of GC and codon preference, this result shows that nucleotide constraints have a major impact on its synonymous codon usage. The results of the correspondence analysis indicate codon usage patterns of PCV of various genotypes, various subgenotypes changed greatly, and significant differences in codon usage patterns of Each virus of Circoviridae.There is much comparability between PCV and its host in their synonymous codon usage, suggesting that the natural selection pressure from the host factor also affect the codon usage patterns of PCV. In particular, PCV genotype II is in synonymous codon usage more similar to pig than to PCV genotype I, which may be one of the most important molecular mechanisms of PCV genotype II to cause disease. The calculations results of the relative abundance of dinucleotides indicate that the composition of dinucleotides also plays a key role in the variation found in synonymous codon usage in PCV. Furthermore, geographic factors, the general average hydrophobicity and the aromaticity may be related to the formation of codon usage patterns of PCV.</p> <p>Conclusion</p> <p>The results of these studies suggest that synonymous codon usage pattern of PCV genome are the result of interaction between mutation pressure and natural selection from its host. The information from this study may not only have theoretical value in understanding the characteristics of synonymous codon usage in PCV genomes, but also have significant value for the molecular evolution of PCV.</p

    catena-Poly[[bis­(nitrato-κ2 O,O′)cobalt(II)]-μ-4,4′-bis­(pyrazol-1-ylmeth­yl)biphenyl-κ2 N 2:N 2′]

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    In the title compound, [Co(NO3)2(C20H18N4)]n, the CoII atom lies on a crystallographic twofold axis and the coordination geometry can be considered as a slightly distorted tetra­hedron defined by two O atoms from two nitrate groups and two N atoms from two ligand mol­ecules. A distorted octa­hedron may be assumed when two of the symmetry-related nitrate O atoms with Co—O distances of 2.3449 (19) Å are added to the coordination environment. Another twofold axis, passing through the middle of the biphenyl bonds, is observed in the crystal structure. A chain is built up by the ligands linking the CoII ions along [101]

    Epimedium brevicornu Maxim extract shows protective activity against Alzheimer's disease in mice

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    Purpose: To investigate the protective effect of Epimedium brevicornu Maxim extract (EBME) against Alzheimer's disease in 3xTg-AD mice. Methods: The cognitive function of 3xTg-AD mice was assessed using Morris water maze test. The levels of amyloid beta deposits and NeuN in the mouse hippocampus were evaluated by immunohistochemistry. Brain neurotrophic-derived factor (BDNF) and tyrosine kinase B (TrkB) expressions were examined by western blot analysis. Results: EBME treatment significantly ameliorated learning and memory deficits in AD mice, as shown by the increased time spent in the target zone during probe tests. Compared with the 3xTg-AD mice (8.4 ± 1.1 s), the escape latency in animals treated with 600 mg/kg EBME (21.5 ± 1.1 s) was significantly increased (p &lt; 0.01). In addition, EBME significantly decreased Aβ deposits, increased NeuN-positive cells, and upregulated the expressions of BDNF (1.5 ± 0.2, p &lt; 0.05) and TrkB (1.6 ± 0.2, p &lt; 0.05) in the 3xTg AD mice. Conclusion: EBME treatment may be a useful therapeutic strategy for managing memory impairment
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