7 research outputs found

    Additional file 5: of Multiple independent structural dynamic events in the evolution of snake mitochondrial genomes

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    Table S2. List of taxa used in this study. *: the species were used in Yan et al. [18]. #: the species were used in Chen and Zhao. [19]. (DOC 132 kb

    Additional file 7: of Multiple independent structural dynamic events in the evolution of snake mitochondrial genomes

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    Table S4. Best-fit models and partitioning schemes selected by PartitionFinder for the dataset analyzed. (DOCX 22 kb

    Additional file 1: of Multiple independent structural dynamic events in the evolution of snake mitochondrial genomes

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    Figure S1. Gene organization of control regions and WANCY cluster in snake mitochondrial genomes. Circular mitogenomes are linearly depicted as an open bar divided into individual genes. Only relevant genes are shown, and in a way that does not reflect actual gene lengths. B, C, D, E came from Kumazawa et al. [16]; A, F from Yan et al. [18]; G from Chen and Zhao [19]. The H- and L- strand encoded genes are denoted above and below each gene box. Transfer RNAs are indicated by their single-letter abbreviations. Abbreviations: 12S, 16S, and P* stand for 12S rRNA, 16S rRNA, and a pseudogene for tRNAPro gene, respectively. Taxa for which have been reported to date are listed in Additional file 5: Table S2. (PDF 612 kb

    Additional file 4: of Multiple independent structural dynamic events in the evolution of snake mitochondrial genomes

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    Figure S3. Homology analysis of OL. The sequences of OL of Alethinophidians and four saurians are aligned. (PDF 574 kb

    Additional file 3: of Multiple independent structural dynamic events in the evolution of snake mitochondrial genomes

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    Figure S2. Bayesian phylogenetic inference tree based on the combined data set of RNA genes and Protein-coding genes. The numbers above the branches indicate the posterior probability. (PDF 256 kb
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