A guide to time-resolved and parameter-free measures of spike train synchrony

Measures of spike train synchrony have proven a valuable tool in both experimental and computational neuroscience. Particularly useful are time-resolved methods such as the ISI- and the SPIKE-distance, which have already been applied in various bivariate and multivariate contexts. Recently, SPIKE-Synchronization was proposed as another time-resolved synchronization measure. It is based on Event-Synchronization and has a very intuitive interpretation. Here, we present a detailed analysis of the mathematical properties of these three synchronization measures. For example, we were able to obtain analytic expressions for the expectation values of the ISI-distance and SPIKE-Synchronization for Poisson spike trains. For the SPIKE-distance we present an empirical formula deduced from numerical evaluations. These expectation values are crucial for interpreting the synchronization of spike trains measured in experiments or numerical simulations, as they represent the point of reference for fully randomized spike trains.Comment: 8 pages, 4 figure

Uncertainty Quantification in Machine Learning for Biosignal Applications -- A Review

Uncertainty Quantification (UQ) has gained traction in an attempt to fix the black-box nature of Deep Learning. Specifically (medical) biosignals such as electroencephalography (EEG), electrocardiography (ECG), electroocculography (EOG) and electromyography (EMG) could benefit from good UQ, since these suffer from a poor signal to noise ratio, and good human interpretability is pivotal for medical applications and Brain Computer Interfaces. In this paper, we review the state of the art at the intersection of Uncertainty Quantification and Biosignal with Machine Learning. We present various methods, shortcomings, uncertainty measures and theoretical frameworks that currently exist in this application domain. Overall it can be concluded that promising UQ methods are available, but that research is needed on how people and systems may interact with an uncertainty model in a (clinical) environment

Uncertainty Quantification in Machine Learning for Biosignal Applications -- A Review

Uncertainty Quantification (UQ) has gained traction in an attempt to fix the black-box nature of Deep Learning. Specifically (medical) biosignals such as electroencephalography (EEG), electrocardiography (ECG), electroocculography (EOG) and electromyography (EMG) could benefit from good UQ, since these suffer from a poor signal to noise ratio, and good human interpretability is pivotal for medical applications and Brain Computer Interfaces. In this paper, we review the state of the art at the intersection of Uncertainty Quantification and Biosignal with Machine Learning. We present various methods, shortcomings, uncertainty measures and theoretical frameworks that currently exist in this application domain. Overall it can be concluded that promising UQ methods are available, but that research is needed on how people and systems may interact with an uncertainty model in a (clinical) environment.Comment: 26 pages, 13 figures, 3 table

Uncertainty Quantification in Machine Learning for Biosignal Applications -- A Review

Uncertainty Quantification (UQ) has gained traction in an attempt to fix the black-box nature of Deep Learning. Specifically (medical) biosignals such as electroencephalography (EEG), electrocardiography (ECG), electroocculography (EOG) and electromyography (EMG) could benefit from good UQ, since these suffer from a poor signal to noise ratio, and good human interpretability is pivotal for medical applications and Brain Computer Interfaces. In this paper, we review the state of the art at the intersection of Uncertainty Quantification and Biosignal with Machine Learning. We present various methods, shortcomings, uncertainty measures and theoretical frameworks that currently exist in this application domain. Overall it can be concluded that promising UQ methods are available, but that research is needed on how people and systems may interact with an uncertainty model in a (clinical) environment

Continuous 2D trajectory decoding from attempted movement: across-session performance in able-bodied and feasibility in a spinal cord injured participant

Objective. In people with a cervical spinal cord injury (SCI) or degenerative diseases leading to limited motor function, restoration of upper limb movement has been a goal of the brain-computer interface field for decades. Recently, research from our group investigated non-invasive and real-time decoding of continuous movement in able-bodied participants from low-frequency brain signals during a target-tracking task. To advance our setup towards motor-impaired end users, we consequently chose a new paradigm based on attempted movement. Approach. Here, we present the results of two studies. During the first study, data of ten able-bodied participants completing a target-tracking/shape-tracing task on-screen were investigated in terms of improvements in decoding performance due to user training. In a second study, a spinal cord injured participant underwent the same tasks. To investigate the merit of employing attempted movement in end users with SCI, data of the spinal cord injured participant were recorded twice; once within an observation-only condition, and once while simultaneously attempting movement. Main results. We observed mean correlations well above chance level for continuous motor decoding based on attempted movement in able-bodied participants. Additionally, no global improvement over three sessions within five days, both in sensor and in source space, could be observed across all participants and movement parameters. In the participant with SCI, decoding performance well above chance was found. Significance. No presence of a learning effect in continuous attempted movement decoding in able-bodied participants could be observed. In contrast, non-significantly varying decoding patterns may promote the use of source space decoding in terms of generalized decoders utilizing transfer learning. Furthermore, above-chance correlations for attempted movement decoding ranging between those of observation only and executed movement were seen in one spinal cord injured participant, suggesting attempted movement decoding as a possible link between feasibility studies in able-bodied and actual applications in motor impaired end users

Detecting intention to walk in stroke patients from pre-movement EEG correlates

Background: Most studies in the field of brain-computer interfacing (BCI) for lower limbs rehabilitation are carried out with healthy subjects, even though insights gained from healthy populations may not generalize to patients in need of a BCI. Methods: We investigate the ability of a BCI to detect the intention to walk in stroke patients from pre-movement EEG correlates. Moreover, we also investigated how the motivation of the patients to execute a task related to the rehabilitation therapy affects the BCI accuracy. Nine chronic stroke patients performed a self-initiated walking task during three sessions, with an intersession interval of one week. Results: Using a decoder that combines temporal and spectral sparse classifiers we detected pre-movement state with an accuracy of 64 % in a range between 18 % and 85.2 %, with the chance level at 4 %. Furthermore, we found a significantly strong positive correlation (r = 0.561, p = 0.048) between the motivation of the patients to perform the rehabilitation related task and the accuracy of the BCI detector of their intention to walk. Conclusions: We show that a detector based on temporal and spectral features can be used to classify pre-movement state in stroke patients. Additionally, we found that patients'' motivation to perform the task showed a strong correlation to the attained detection rate of their walking intention