14 research outputs found
Summary of the identified SSR motifs on the date palm PDK30 genome sequence.
<p>Summary of the identified SSR motifs on the date palm PDK30 genome sequence.</p
SSR primers designed within disease resistance related genes.
<p>SSR primers designed within disease resistance related genes.</p
Comparison between primers product length within genic and intergenic region on date palm genome.
<p>The first column (left) represents the total genome length and total length of primers product, and the other two columns represent total length of primers product comparing to the total length of genic and intergenic regions.</p
The comparison between mono, di and tri- repeats in both genic and intergenic regions.
<p>The numbers in boxes (1, 2, and 3) and (4, 5 and 6) represent the repeat types in the genic and intergenic regions, respectively. Similar repeats in the genic and intergenic regions are labeled with the same color. Numbers with pink color represent the number of repeats in the genic regions, while those with blue color refer to the intergenic regions. The latter data are illustrated with the same colors as histograms.</p
Comparison between the number of SSR primers and the number of detected SNPs within the genic and the Intergenic regions in the date palm genome.
<p>Comparison between the number of SSR primers and the number of detected SNPs within the genic and the Intergenic regions in the date palm genome.</p
Comparison between non-triplet repeat types according to the number of repeats in both genic and intergenic regions.
<p>Comparison between non-triplet repeat types according to the number of repeats in both genic and intergenic regions.</p
The annotation of the 16 enzymes assigned using our SSR primers in the amino sugar and nucleotide sugar metabolism pathway as revealed by the Blast2GO program.
<p>Each enzyme code is highlighted with different color.</p
The Distribution of the various SSR classes in genic (introns and exons) and intergenic regions in date palm genome.
<p>The Distribution of the various SSR classes in genic (introns and exons) and intergenic regions in date palm genome.</p
<i>In vitro</i> PCR analysis of the genomic DNA from six date palm cultivars using eight designed SSR primer pairs (A-H).
<p><i>In vitro</i> PCR analysis of the genomic DNA from six date palm cultivars using eight designed SSR primer pairs (A-H).</p
Summary statistics of the <i>in silico</i> validated detected SSR in date palm genome sequences.
<p>Summary statistics of the <i>in silico</i> validated detected SSR in date palm genome sequences.</p